Gene Smal_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3749 
Symbol 
ID6474631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4216780 
End bp4218168 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content71% 
IMG OID642732950 
Productbranched-chain alpha-keto acid dehydrogenase subunit E2 
Protein accessionYP_002030131 
Protein GI194367521 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA CCAAGAACTT CAACCTGCCC GACCTGGGCG AAGGCCTGCC GGACGCGACC 
ATCGTCGAGT GGTTCGTCAA GGAAGGCGAT GTGATCAAGC TGGACGAGCC ACTGGTCTCG
ATGGAGACCG CCAAGGCCGT CGTCGAAGTG CCGTCGCCGT TCTCCGGCAC GGTGCTGAAG
CTGTCCGGCG CTGCCGGCGA CATCATCCCG ACCGGTTCGG TGCTGGCCAG CTTCGCGCTG
GACCCGAACC TGCCGCAGCG TGCCGATGGC CAGGACACCG GCCACAGCCA CGGTCATGCA
GCGCCGGCCG CTGCACCGAC CCCGCCGCCG CTGCCGGCCG CTGCCGCACC GGTGGCCGCC
GAAGCCGCCA AGCCCGCCGC CGCCGAACGT GATGACGCCG GTACCGTGGT CGGCGCGATG
CAGAGCTCCA ACGCCGTGCA CGCCGAACAG GCGCTGGCCG TCGGTGGCGT CAAGGCCGTA
CCGGCCGTGC GTGCCACCGC GCGCAAGCTG GGCGTGGACC TGTCCCGCGT ACGCGCCACC
GGCGCCGATG GCGCGGTGAC CATGGCCGAC GTCAAGCAGG CGGCTGCGGA TGGCAGCGCA
AAGATCGGTG CCGCTCCGGC GCCGGCCGCT GCTGCCGCCT ACGCCGCGCC GGCACCGGCG
CAGGTGTCTG CCCCGGTGCA GAGCGAAGCG CGCACCCCGC TGTCCGCCGC CGGCAAGCCG
ATGCGCACCC AGCCGCCGGG CGTGGTCGCC AAGGGCCAGC CGGAACCGCT GAAGGGCGTG
CGCCGCAACA TGGCGCGGGT GATGGCCGAT GCGCACAGCA AGGTCGTGCC GACCACGCTG
AACGACGACG CCGACATCCA CGCCTGGCTG CCGGGCAACG ACGTCACCGC GCGCCTGGTG
CGTTCGATCG TGGTCGCCGC ACAGAAGGTG CCGGCGATGA ACGCCTGGTT CGACGGTGAA
GCACTGACCC GCACCCTGCA CGCCCAGGTC GACATCGGCA TTGCCGTGGA CACCGACGAC
GGCCTGTTTG TGCCGGCCCT GCGCAATGCC GACATGCTCG ACGCACGCGG CATCCGCGAA
GGCGTCAACC GCCTGCGCGA GCAGGTGGAA TCGCGTTCGA TCGCCGCCTC GGAACTGAGC
GGCTACACCA TCTCGCTGTC CAACTTCGGC ATGTTCGCCG GCCGCTACGC GACCCCGGTC
GTGGTGCCGC CATGCGTGGC CATCGTCGGT GCCGGCCGTG CCCGCCACCA GATGACCCCG
GTGATGGGCG GCGTGGAAGC GCACAAGGTA ATCCCGCTGT CGGTCACCTT CGACCACCGC
GCGGCCACGG GTGGTGAAGC GGCACGCTTC CTGCGCGCGA TGATGGACGA TTTGGCGCTG
GCCAGCTGA
 
Protein sequence
MSQTKNFNLP DLGEGLPDAT IVEWFVKEGD VIKLDEPLVS METAKAVVEV PSPFSGTVLK 
LSGAAGDIIP TGSVLASFAL DPNLPQRADG QDTGHSHGHA APAAAPTPPP LPAAAAPVAA
EAAKPAAAER DDAGTVVGAM QSSNAVHAEQ ALAVGGVKAV PAVRATARKL GVDLSRVRAT
GADGAVTMAD VKQAAADGSA KIGAAPAPAA AAAYAAPAPA QVSAPVQSEA RTPLSAAGKP
MRTQPPGVVA KGQPEPLKGV RRNMARVMAD AHSKVVPTTL NDDADIHAWL PGNDVTARLV
RSIVVAAQKV PAMNAWFDGE ALTRTLHAQV DIGIAVDTDD GLFVPALRNA DMLDARGIRE
GVNRLREQVE SRSIAASELS GYTISLSNFG MFAGRYATPV VVPPCVAIVG AGRARHQMTP
VMGGVEAHKV IPLSVTFDHR AATGGEAARF LRAMMDDLAL AS