Gene Smal_3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3747 
Symbol 
ID6474629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4215361 
End bp4216428 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content68% 
IMG OID642732948 
ProductTransketolase central region 
Protein accessionYP_002030129 
Protein GI194367519 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGA TCAAGAACGG CGCGCCCGGC GCGCACACCA ACGCCGCCGA CAGCGCCGCC 
GTCGCGCGCG GAGAACAGAG CATGACCACC ACCCCCATCA CCCTGATCGA AGCCATCACC
CAGGCACTGG CCTGGGAGCT GGAGCACGAC CCGTCGGTGC TGGTGCTGGG CGAGGACGTG
GGCGTCAACG GCGGCGTGTT CCGCGCCACC GCCGGCCTGC AGCAGCGCTT CGGCTCCGAG
CGCATCCTCG ACACCCCGCT GGATGAAACC ACCATCGCCG GCCTGACCAT CGGTCTGGCG
GCACAGGGCA TGAAGCCGGT GGCCGAAGCC CAGTTCGACG GTTTCATGTA CCCGATGGTC
GACCATATCG TCTGCCATGC CGCACGCCTG CGTTACCGCA CGCGTGGCCG CCTGCACTGC
CCGATGGTGC TGCGCGTGCC GTGGGGCGGT GGTATCCGCG CACCGGAACA CCACAGCGAA
GCCAACGAGG CGATCTTCAC CAACGTGCCG GGCCTGCGCG TGGTGCTGCC GTCGTCGCCG
CAGCGTGCCT ACGGCCTGCT GCTGGCCGCG ATCCGCGAGC CGGATCCGGT CATCTACATG
GAGCCCAAGC GCATCTACCG CCAGTACAAG GAAGTGGTCG TCAACGACGG CGAAGCCTTG
CCGCTGGACG TCTGCTTCGT GCTGCGCGAC GGCACCGACG TGACCCTGGT GACCTGGGGC
GCGCAGGTGA AGGAAGCGCT GGAAGCGGCC GACAAGCTGG CCGGTGAAGG CATCAGCGCC
GAAGTCATCG ACGTTGCCAC GCTGCGTCCG CTGGATTTCG CCACCATCGC CGAATCGGTG
GCCAAGACCG GCCGCTGCGT GATCGTGCAG GAGGCCCCGA AGACCGCGGG CTTCGGCGCC
GAGATCGCCG CGCGCCTGGC CGAGGAATCG ATCTACGACC TGCTGGCCCC GGTCGAGCGC
GTCACTGGCT ACGACACCCA CATTCCGCTG TTCCGCCTGG AAATGAAGTA CCTGCCGAGC
GTTGAGCGGA TCGTGGCTGC GGCCAAGCGC GCGGTGGCGG CCGGCTGA
 
Protein sequence
MDEIKNGAPG AHTNAADSAA VARGEQSMTT TPITLIEAIT QALAWELEHD PSVLVLGEDV 
GVNGGVFRAT AGLQQRFGSE RILDTPLDET TIAGLTIGLA AQGMKPVAEA QFDGFMYPMV
DHIVCHAARL RYRTRGRLHC PMVLRVPWGG GIRAPEHHSE ANEAIFTNVP GLRVVLPSSP
QRAYGLLLAA IREPDPVIYM EPKRIYRQYK EVVVNDGEAL PLDVCFVLRD GTDVTLVTWG
AQVKEALEAA DKLAGEGISA EVIDVATLRP LDFATIAESV AKTGRCVIVQ EAPKTAGFGA
EIAARLAEES IYDLLAPVER VTGYDTHIPL FRLEMKYLPS VERIVAAAKR AVAAG