| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3725 |
|---|
| Symbol | |
|---|
| ID | 6474607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 4193152 |
|---|
| End bp | 4193826 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642732926 |
|---|
| Product | ribulose-phosphate 3-epimerase |
|---|
| Protein accession | YP_002030107 |
|---|
| Protein GI | 194367497 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
|---|
| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.897424 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACT GCCTCATCGC CCCCTCCATC CTGTCCGCCA ACTTCGCCCG CCTCGGCGAG
GAAGTCGACA ACGTCCTCGC CGCCGGCGCG GACTGGGTCC ACTTCGACGT GATGGACAAC
CACTACGTGC CGAACCTGAC CATCGGCCCG ATGGTCTGCC AGGCCCTGCG CAAGCACGGC
GTGACCGCGC CGATCGACGT GCACCTGATG GTCGAACCGG TGGACCGCAT CATCCCGGAC
TTCGCCGAGG CCGGTGCCAC CTACATCAGC TTCCACCCGG AAGCGAGCCG CCACGTGCAC
CGCACCATCC AGCTGATCCG CTCGCTGGGT TGCAAGCCGG GCATCGTGCT GAACCCGGCC
ACCCCGGTGG ACATCCTCGA CTGGGTGCTG GATGACCTGG ACCTGGTGCT GCTGATGTCG
GTCAACCCGG GCTTCGGTGG CCAGGCCTTC ATTCCTTCGG CATTGGACAA GCTGCGTGTG
GTGCGCAAGA AGATCGATGC CAGCGGCCGC GACATCCGCC TGGAGATCGA CGGTGGCGTG
AAGGCCGACA ACATCGGCGA GATCGCTGCG GCCGGTGCCG ACACCTTCGT CGCCGGTTCG
GCCATCTTCA ACGCCAAGAC CAGCTACCAG GACGTGATCG CGCAGATGCG CGCCAACGTC
GCCGCGGCGC GCTGA
|
|---|
| Protein sequence | MSNCLIAPSI LSANFARLGE EVDNVLAAGA DWVHFDVMDN HYVPNLTIGP MVCQALRKHG
VTAPIDVHLM VEPVDRIIPD FAEAGATYIS FHPEASRHVH RTIQLIRSLG CKPGIVLNPA
TPVDILDWVL DDLDLVLLMS VNPGFGGQAF IPSALDKLRV VRKKIDASGR DIRLEIDGGV
KADNIGEIAA AGADTFVAGS AIFNAKTSYQ DVIAQMRANV AAAR
|
|---|
| |