Gene Smal_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3706 
Symbol 
ID6474586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4176218 
End bp4178434 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content69% 
IMG OID642732905 
ProductHpt sensor hybrid histidine kinase 
Protein accessionYP_002030088 
Protein GI194367478 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCTGT GGGGCGCGCT GCTGGTTGCC CTTGCTGCGG CCGCCATCGT GCTGCTGATG 
GGCCTGCGCC TGCGCACGCG CAACCGTGCG CTGGCCAGCC TGCAGCGCGA GCGCAGCGTA
CTGGCCAGCG AGCGCGACCA GCTGCGCCGC ACCACCGAAC GCCAGGGCCA GCTGGAACAG
CAGCTGCTGC AGGCCAAGCA GGCCGCCGAA GCGGCGGTGC TGGCCAAGGG CGAGTTCCTG
GCCACGATGA GCCATGAGAT CCGCACGCCG CTCAACGGCA TCCTGCCGAT GCTGGAGCTG
ATCGCACGTG GACCGCTGGG CGAGGACCAG CGACAGATGC TGGCCACCGC CTCGGCCAGC
TCGCAGCAGC TGCTGCGCAT CGTCGACGAC ATCCTCGATT ACTCGCGCCT GGAAGCGCAG
GCGCTGGAAC TGGAGATCAC CAGCTTCAAC CTGCGCGAGC TGCTCGATGG CGTGGTGCAG
CTGATGCAGC GCGCCGCCGA TTCGAAGGGC CTGGTACTGG GCCTGCAGCT GGACCCGTCG
GTACGGCTGC CAGTGCGTGG TGACCCGGTG CGCCTGCGCC AGGTGCTGAG CAACCTGCTT
GCGAACGCGA TCAAGTTCAC CGCGCGTGGC CAGGTGCAGC TGCGCGTGCA GCGGCTGGGC
GAAGGTGCCG CGCAACACCA GCTGCGCTTC GAGATCACCG ATACCGGCAT CGGTATCGAC
CAGGCACTAC AGGCGCGACT GTTCCAGTCC TTCAGCCAGG CCGATGCCTC GACTACCCGC
ATCTATGGTG GCACCGGCCT GGGCCTCGCC ATCTGCAAGC GCATCATCGA CCTGATGCAG
GGCCGCATCG GCGTGCAGTC CACGCCGGGC CAGGGCGCCA CGTTCTGGTT CGAGATTCCG
CTGCTGAAGG TACCCGGCGA TCTGCCCGCG ATGGCGCGCA CACCCGCAGC GCTGCTGTTG
TTCAGTGCCG ATGCCACGCT GCAGGCACGC GTCGAGCGCG TCGCGGCCCA CCATGGCCTG
CAGGTTCAGC CGCTGCCGCA ACTGGATGCA CTGGTCGAAC GCCTGCGCGC GGTGCCGCGC
CCTGGCCGGC AGGCACCTGC CTGGCTGCTG GTTGATGCAC GTGCGCGCCG CAACGGCGAG
GTGACGCTGC AGCGGGCATT GGCCGAACGT GGCGAGGACG ACGCACTGCG GGTGCTGTGG
CTGCAGGATG AGGCGCTTTC GCCGCACCCG CGCCAGCACC AGCTGCCCGC CCATTTCGAC
GATGCCGCCC TGCATGCGCT GCTGGCCGTT CCGGTGGCGC ATGCGCGCCC GGCTGCGCTG
CTGGCCAACG CGGAAGACGG GCAACCGGCT GCGGCGTTGC CGCCGCTGCA CCTGCGCGTG
CTGCTGGTGG AAGACAACAC GGTCAACCGC ATGGTGGCCG AACAGCTGCT GCGGGTATTC
CAGTGCGAGG TGCGCAACGC CAGCGATGGC GAACAGGCAC TGCTCGCGCT GCGCGAGGGC
GGCGTGGACG TGGTGCTGAT GGACTGCCAG ATGCCGGTGC TGGATGGCTA CGCCGCCACC
CGCCAGTGGC GCGCCGAGGA AATGGAAGCC GGTCGCCCGC GGTTGCCGAT CATCGCGATG
ACCGCCAATG CCATGGCCGG TGACCGCGAA CGCTGCCTGC AGGCCGGTAT GGATGACTAC
CTGTCCAAGC CGATCGCGCG CGCCACGTTG CATGCGCTGT TGCAGCGCTG GGGGGGCGGT
AGAGCTGCAT CACCTGCACG GCCTTCTGTA GAGCCGAGCC ATGCTCGGCT GACGGCCAAT
AGCAGTCGCG CTCCATCAGC CGAGCATGGC TCGGCTCTAC AAGACGATGA CAGCCGGGTC
GGCTCCAAGC CACAGCCGGT GCTTGACCGC GGTGTTCTGG ACGAACTGCA CGCGGTGATC
GGCGATGCCG CGCTCCAGAT CGTCGCGGTG TTCCTGGAAG ATGCACCCGC AATGGTGCAG
CAGCTGCAGC AGGCCGCGCA GAACGGCGAC GAGCCGCGCC TGCAGGCGCT CGCGCACACC
CTGAAATCAT CCAGTGCGAA TGTGGGCGTG TTGTCGCTGT CGGCGGTCGC GCAGCGCATC
GAGCAGGAAG CCCGTGCCGG CAGCCTGCAG CGCCCCGCCG TGGCGGTGGC GCTGCTGGTT
GCGGAATTCG CCCGCGCGCG CGTGGCGCTG ACGGGCTACC TGGCACAGCA TCGGTAG
 
Protein sequence
MPLWGALLVA LAAAAIVLLM GLRLRTRNRA LASLQRERSV LASERDQLRR TTERQGQLEQ 
QLLQAKQAAE AAVLAKGEFL ATMSHEIRTP LNGILPMLEL IARGPLGEDQ RQMLATASAS
SQQLLRIVDD ILDYSRLEAQ ALELEITSFN LRELLDGVVQ LMQRAADSKG LVLGLQLDPS
VRLPVRGDPV RLRQVLSNLL ANAIKFTARG QVQLRVQRLG EGAAQHQLRF EITDTGIGID
QALQARLFQS FSQADASTTR IYGGTGLGLA ICKRIIDLMQ GRIGVQSTPG QGATFWFEIP
LLKVPGDLPA MARTPAALLL FSADATLQAR VERVAAHHGL QVQPLPQLDA LVERLRAVPR
PGRQAPAWLL VDARARRNGE VTLQRALAER GEDDALRVLW LQDEALSPHP RQHQLPAHFD
DAALHALLAV PVAHARPAAL LANAEDGQPA AALPPLHLRV LLVEDNTVNR MVAEQLLRVF
QCEVRNASDG EQALLALREG GVDVVLMDCQ MPVLDGYAAT RQWRAEEMEA GRPRLPIIAM
TANAMAGDRE RCLQAGMDDY LSKPIARATL HALLQRWGGG RAASPARPSV EPSHARLTAN
SSRAPSAEHG SALQDDDSRV GSKPQPVLDR GVLDELHAVI GDAALQIVAV FLEDAPAMVQ
QLQQAAQNGD EPRLQALAHT LKSSSANVGV LSLSAVAQRI EQEARAGSLQ RPAVAVALLV
AEFARARVAL TGYLAQHR