Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3676 |
Symbol | |
ID | 6474556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4137022 |
End bp | 4138773 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642732875 |
Product | transcription termination factor Rho |
Protein accession | YP_002030058 |
Protein GI | 194367448 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.939305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCGATA ACACTCCCGA AACCGGCAGC GCCGAAGCGC CCGCCGAAAA GCGCGTGCGC AAGCCCCGCG TAGCCAAGGC TGCCGCTCCG GCCGCCGCCG AAACCAGCGC CGCACCGGCG CAGCCCGCCC TGCCGCTGGC AGCCGCGCCC GAAGCGCCGG CACCGGCCGC AGCGGCCCCC GCGCCGAGCG CGCCCGCCGC CGAGGCCCCT GCCAGCAGTG GCGGCGGTGA CGGTGGTGAG GGCCGCGAAT CCGGCCAGCC GCGGCAGCAG AACCACCAGG GCGGTGGCCA GAACCAGAAC CCGTACAACC AGAACCAGCA GGGTCAGGGT CAGGGCAATC GCCGCGACCG TTTCCGCAAC CGCCGCGATC GTGATCGCAA TGGCGGCGGC GGCGGTGGTC GCTTTCGCGA TGACGGCATG CCCAACGACA ACGGCGAGCA GCAGCCCTTC GTGCCGCGTC CGCATGCCAG CGTGCCGGAA GGTTTCCCGG TCTACTCGCT GAGCGACCTC AAGCGCATGC CGGCACAGAA GCTGCTGGAG ATCGCCGAAC AACTGCAGAT CTCCGAAGGC GTGGCGCGCG CGCGCAAGCA GGACGTGATC TTCGCCCTGC TGAAGGTGCT GACCCGCCAT GGTGACGGCG TTGCCGCCGA CGGCGTGCTG GAAATCCTGC CGGACGGCTT CGGCTTCCTG CGCGCGGCCG AAGCGAGCTA CCTGGCCGGC CCGGACGACA CCTACATCTC GCCCAGCCAG ATCCGCCGCT TCAACCTGCG CACCGGCGAC CACCTGTCCG GCCGCATCCG CTTCCCCAAG GACGGCGAGC GCTACTTCGC GCTGTCGATC GTGGACACCA TCAACGGTGA GCCGCTGGAA GCATCGAAGA ACAAGGTGCT GTTCGAGAAC CTGACCGCAC TGTTCCCGCG CCGCCGCTTC ACCCTGGAGC GTGGCAACGG TTCGTCGGAA GACATCACCG GCCGCATCCT CGACCTGATG GCGCCGCAGG GCAAGGGCCA GCGCTCGCTC ATCGTTTCCC AGCCGAAGGC GGGTAAAACG ATGATGATGC AGCAGGTGGC CACGGCCATC ACCACCAACC ACCCGGACGT GCACCTGATC GTGCTGCTGA TCGACGAGCG CCCGGAAGAA GTGACCGAGA TGCAGCGCAC CGTGCGCGGT GAAGTCATCA GCTCGACCTT CGACGAGCCG GCCGCGCGCC ACGTGCAGGT GGCCGAAATG GTCATCGAGC GCGCCAAGCG CCTGGTCGAG CACAAGAAGG ACGTGGTGAT CCTGCTCGAC TCGATCACCC GCCTGGCCCG CGCCTACAAC AACGTGGTGC CGAGCTCGGG CAAGGTGCTG ACCGGTGGTG TGGACGCCAA CGCCCTGCAC CGTCCGAAGC GCTTCTTCGG TGCCGCGCGT AATGTGGAAG AAGGCGGCAG CCTGACCATC ATCGCCACCG CGCTGGTCGA CACCGGCTCG AAGATGGACG AGGTGATCTA CGAAGAGTTC AAGGGCACCG GCAACAGCGA AGTGCACCTG AGCCGCCGTA TCGCTGAAAA GCGCGTGTTC CCGGCCATCG ACATCAACCG TTCCGGCACC CGCCGCGAAG ACCTGCTGAT CGAGCCGGAG CTGCTGCAGA AGATCTGGAT CCTGCGCAAG CTGCTGCATC CGATGGATGA AATGGCCGCG ATGGAGTTCC TGCTCGACAA GATGAAGAAC ACCAAGTCCA ACGACGAATT CTTCGGTTCG ATGAAGCGCT GA
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Protein sequence | MSDNTPETGS AEAPAEKRVR KPRVAKAAAP AAAETSAAPA QPALPLAAAP EAPAPAAAAP APSAPAAEAP ASSGGGDGGE GRESGQPRQQ NHQGGGQNQN PYNQNQQGQG QGNRRDRFRN RRDRDRNGGG GGGRFRDDGM PNDNGEQQPF VPRPHASVPE GFPVYSLSDL KRMPAQKLLE IAEQLQISEG VARARKQDVI FALLKVLTRH GDGVAADGVL EILPDGFGFL RAAEASYLAG PDDTYISPSQ IRRFNLRTGD HLSGRIRFPK DGERYFALSI VDTINGEPLE ASKNKVLFEN LTALFPRRRF TLERGNGSSE DITGRILDLM APQGKGQRSL IVSQPKAGKT MMMQQVATAI TTNHPDVHLI VLLIDERPEE VTEMQRTVRG EVISSTFDEP AARHVQVAEM VIERAKRLVE HKKDVVILLD SITRLARAYN NVVPSSGKVL TGGVDANALH RPKRFFGAAR NVEEGGSLTI IATALVDTGS KMDEVIYEEF KGTGNSEVHL SRRIAEKRVF PAIDINRSGT RREDLLIEPE LLQKIWILRK LLHPMDEMAA MEFLLDKMKN TKSNDEFFGS MKR
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