Gene Smal_3676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3676 
Symbol 
ID6474556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4137022 
End bp4138773 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content67% 
IMG OID642732875 
Producttranscription termination factor Rho 
Protein accessionYP_002030058 
Protein GI194367448 
COG category[K] Transcription 
COG ID[COG1158] Transcription termination factor 
TIGRFAM ID[TIGR00767] transcription termination factor Rho 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.939305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGATA ACACTCCCGA AACCGGCAGC GCCGAAGCGC CCGCCGAAAA GCGCGTGCGC 
AAGCCCCGCG TAGCCAAGGC TGCCGCTCCG GCCGCCGCCG AAACCAGCGC CGCACCGGCG
CAGCCCGCCC TGCCGCTGGC AGCCGCGCCC GAAGCGCCGG CACCGGCCGC AGCGGCCCCC
GCGCCGAGCG CGCCCGCCGC CGAGGCCCCT GCCAGCAGTG GCGGCGGTGA CGGTGGTGAG
GGCCGCGAAT CCGGCCAGCC GCGGCAGCAG AACCACCAGG GCGGTGGCCA GAACCAGAAC
CCGTACAACC AGAACCAGCA GGGTCAGGGT CAGGGCAATC GCCGCGACCG TTTCCGCAAC
CGCCGCGATC GTGATCGCAA TGGCGGCGGC GGCGGTGGTC GCTTTCGCGA TGACGGCATG
CCCAACGACA ACGGCGAGCA GCAGCCCTTC GTGCCGCGTC CGCATGCCAG CGTGCCGGAA
GGTTTCCCGG TCTACTCGCT GAGCGACCTC AAGCGCATGC CGGCACAGAA GCTGCTGGAG
ATCGCCGAAC AACTGCAGAT CTCCGAAGGC GTGGCGCGCG CGCGCAAGCA GGACGTGATC
TTCGCCCTGC TGAAGGTGCT GACCCGCCAT GGTGACGGCG TTGCCGCCGA CGGCGTGCTG
GAAATCCTGC CGGACGGCTT CGGCTTCCTG CGCGCGGCCG AAGCGAGCTA CCTGGCCGGC
CCGGACGACA CCTACATCTC GCCCAGCCAG ATCCGCCGCT TCAACCTGCG CACCGGCGAC
CACCTGTCCG GCCGCATCCG CTTCCCCAAG GACGGCGAGC GCTACTTCGC GCTGTCGATC
GTGGACACCA TCAACGGTGA GCCGCTGGAA GCATCGAAGA ACAAGGTGCT GTTCGAGAAC
CTGACCGCAC TGTTCCCGCG CCGCCGCTTC ACCCTGGAGC GTGGCAACGG TTCGTCGGAA
GACATCACCG GCCGCATCCT CGACCTGATG GCGCCGCAGG GCAAGGGCCA GCGCTCGCTC
ATCGTTTCCC AGCCGAAGGC GGGTAAAACG ATGATGATGC AGCAGGTGGC CACGGCCATC
ACCACCAACC ACCCGGACGT GCACCTGATC GTGCTGCTGA TCGACGAGCG CCCGGAAGAA
GTGACCGAGA TGCAGCGCAC CGTGCGCGGT GAAGTCATCA GCTCGACCTT CGACGAGCCG
GCCGCGCGCC ACGTGCAGGT GGCCGAAATG GTCATCGAGC GCGCCAAGCG CCTGGTCGAG
CACAAGAAGG ACGTGGTGAT CCTGCTCGAC TCGATCACCC GCCTGGCCCG CGCCTACAAC
AACGTGGTGC CGAGCTCGGG CAAGGTGCTG ACCGGTGGTG TGGACGCCAA CGCCCTGCAC
CGTCCGAAGC GCTTCTTCGG TGCCGCGCGT AATGTGGAAG AAGGCGGCAG CCTGACCATC
ATCGCCACCG CGCTGGTCGA CACCGGCTCG AAGATGGACG AGGTGATCTA CGAAGAGTTC
AAGGGCACCG GCAACAGCGA AGTGCACCTG AGCCGCCGTA TCGCTGAAAA GCGCGTGTTC
CCGGCCATCG ACATCAACCG TTCCGGCACC CGCCGCGAAG ACCTGCTGAT CGAGCCGGAG
CTGCTGCAGA AGATCTGGAT CCTGCGCAAG CTGCTGCATC CGATGGATGA AATGGCCGCG
ATGGAGTTCC TGCTCGACAA GATGAAGAAC ACCAAGTCCA ACGACGAATT CTTCGGTTCG
ATGAAGCGCT GA
 
Protein sequence
MSDNTPETGS AEAPAEKRVR KPRVAKAAAP AAAETSAAPA QPALPLAAAP EAPAPAAAAP 
APSAPAAEAP ASSGGGDGGE GRESGQPRQQ NHQGGGQNQN PYNQNQQGQG QGNRRDRFRN
RRDRDRNGGG GGGRFRDDGM PNDNGEQQPF VPRPHASVPE GFPVYSLSDL KRMPAQKLLE
IAEQLQISEG VARARKQDVI FALLKVLTRH GDGVAADGVL EILPDGFGFL RAAEASYLAG
PDDTYISPSQ IRRFNLRTGD HLSGRIRFPK DGERYFALSI VDTINGEPLE ASKNKVLFEN
LTALFPRRRF TLERGNGSSE DITGRILDLM APQGKGQRSL IVSQPKAGKT MMMQQVATAI
TTNHPDVHLI VLLIDERPEE VTEMQRTVRG EVISSTFDEP AARHVQVAEM VIERAKRLVE
HKKDVVILLD SITRLARAYN NVVPSSGKVL TGGVDANALH RPKRFFGAAR NVEEGGSLTI
IATALVDTGS KMDEVIYEEF KGTGNSEVHL SRRIAEKRVF PAIDINRSGT RREDLLIEPE
LLQKIWILRK LLHPMDEMAA MEFLLDKMKN TKSNDEFFGS MKR