| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3666 |
|---|
| Symbol | |
|---|
| ID | 6474546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 4125977 |
|---|
| End bp | 4126852 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642732865 |
|---|
| Product | RNA polymerase factor sigma-32 |
|---|
| Protein accession | YP_002030048 |
|---|
| Protein GI | 194367438 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA ACACCTCTAC TGCCCTTGTG GCAAACAATC TCCCGATTCC CAGTGCGCTC
GGTTCGCTGG ACGCCTACAT CGGTGCCGTG CACCAGATCC CGGTGTTGTC GGTCGATGAC
GAACAGGACC TGGCCCGTCG CTTCCGCGAC GGCAACGATC TGGACGCCGC CCGCGAGCTG
GTGCATTCGC ACCTGCGCTT CGTGGTGCAC GTGGCCCGCG GCTACAACGG CTACGGCCTT
GCCCTGGGCG ACCTGATCCA GGAAGGCAAC ATCGGCCTGA TGAAGGCGGT CAAGCGCTTC
GACCCGGAAA TGGGCGTGCG CCTGGTCTCC TTCGCGGTGC ACTGGATCCG TGCCGAGATG
CACGAGTTCA TCCTGAAGAA CTGGCGCATC GTCAAGGTCG CCACGACCAA GGCGCAGCGC
AAGCTGTTCT TCAACCTGCG CAAGTCGAAG ACGCGCCTGG GCTGGATGAA CGCGGCCGAA
GTCAGCGCGG TGGCCAAGGA TCTGAACGTG TCCGAGCGCG AGGTCATGGA AATGGAGTCG
CGCCTGTCCG GTCGCGATAT CGGTTTCGAT GCGCCGACCG ATGAGGACAA CGAGCACGCG
CCGCCGTCGC CGGCCGCTTA TCTCGTGGCC AATGACGAAG ACCCGTCGAT GGCCTACGAG
CGTGCCGACA GCGAAGACAA CCAGATGCAG CTGCTGCGCG AAGGCTTGGC CGAGCTGGAT
GCGCGTTCGC GTGACATCAT CCGCCGCCGC TGGCTGGATG CCGACAGCAA GGTGACGCTG
CAGGAGCTGG CCGACGAGTA CGGCGTGTCG GCCGAGCGTA TCCGCCAGGT TGAAGCCAAT
GCGCTGAAGA AGATGAAGGC GCTGTTCACC GCGTAA
|
|---|
| Protein sequence | MSQNTSTALV ANNLPIPSAL GSLDAYIGAV HQIPVLSVDD EQDLARRFRD GNDLDAAREL
VHSHLRFVVH VARGYNGYGL ALGDLIQEGN IGLMKAVKRF DPEMGVRLVS FAVHWIRAEM
HEFILKNWRI VKVATTKAQR KLFFNLRKSK TRLGWMNAAE VSAVAKDLNV SEREVMEMES
RLSGRDIGFD APTDEDNEHA PPSPAAYLVA NDEDPSMAYE RADSEDNQMQ LLREGLAELD
ARSRDIIRRR WLDADSKVTL QELADEYGVS AERIRQVEAN ALKKMKALFT A
|
|---|
| |