| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3610 |
|---|
| Symbol | |
|---|
| ID | 6474490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 4064831 |
|---|
| End bp | 4065997 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642732809 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002029992 |
|---|
| Protein GI | 194367382 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.479598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCG CCGAAAATTC CCGCTTCCGT CGTGCCCGCC TGTTGTGGGC GGTGCTGGCC
ATCGCCCTCG TCGCCGTTCT GGCGTGGTGG CTGTGGCCCC GGAACGGCGC CGGCAGCAGC
GACGATGCGC CGGGCAAGAC GGTGCCGGTA CGCGTGGCAC GCGCCAGCGC CGAGCCGCTG
GTGCTGCGCC TGAAGGCGGT CGGTACGGTC ACCCCGCTGC ACAGCGTGGT GGTACGCAGC
CGCGTGGATG GCGAACTGCT ACGGCTGCAT TTCCAGGAAG GCCAGCAGGT GAAGGCCGGC
GATCTGCTGG CGCAGATCGA CCCGCGCCCG TATGAAGTGA AGCTGGCACA GGCGCAGGGT
ACCCAGCAGC AGAATCTGGC CGAGCTGGAA AACGCCGAGC GCCAGCTGCA GCGCTACCGC
GAACTGCAGA AGCAGAACTA CGTGTCCGGG CAGGAACTGA GCGACCAGCA GAGCAAGGTG
CGCCAGCTGC AGGGCCGCCG CCTCAGCGAT CAGGCGTCTG TTGATGAAGC GCGCCTGCAG
CTGCAGTACA CCCGCATCAC CGCGCCGGTC AGTGGCCGCG TCGGGCTGCG CCGGTTGGAC
GTGGGCAACC TGGTGCGCGC CAGCGATGCC GAAGGCCTGG TGACGCTGGC GCAGACCGCG
CCGATCAGCG TGCTGTTCAC CGTGCCCGAA CCCGAGCTGC CTGCGCTGCT CGATGCCGTG
CAGGCGCAAC CGGCACTGGC GGTGGAAACC TGGGACCGCG AAGAACGCCG GCAGCTGGCC
CGCGGCTCGC TGTCCAGCGT CGACAACCGC ATCGATACCA CCACCGGCAC ATTGAAACTG
CGTGCGCACT TCGACAACCA CGATCTGGCG CTGTTCCCCA ACCAGTTCGT CAACGTCCGC
CTGCAGCTGG GCGAGCAGCC CGCGCTGCTG ATTCCCGATG CCGCCGTGCA GTTCGGCAGC
CAGGGCAACT ACGTGCATAT CGTCGACAAG GACAGCAAGG CACAACGCCG CACCGTGGTG
CTCGGTCCGG CCGATGATGG ACGCGTGGCC GTGCGCTCCG GGCTGGCCGC AGGGGACAAG
GTGGTGATCG AAGGCATCGA CGGGCTGGAA GACGGCACGG CGGTGGAGAT CATCACCGAG
GAGGCCGCGA CCAAGGCCGG CGCATGA
|
|---|
| Protein sequence | MSVAENSRFR RARLLWAVLA IALVAVLAWW LWPRNGAGSS DDAPGKTVPV RVARASAEPL
VLRLKAVGTV TPLHSVVVRS RVDGELLRLH FQEGQQVKAG DLLAQIDPRP YEVKLAQAQG
TQQQNLAELE NAERQLQRYR ELQKQNYVSG QELSDQQSKV RQLQGRRLSD QASVDEARLQ
LQYTRITAPV SGRVGLRRLD VGNLVRASDA EGLVTLAQTA PISVLFTVPE PELPALLDAV
QAQPALAVET WDREERRQLA RGSLSSVDNR IDTTTGTLKL RAHFDNHDLA LFPNQFVNVR
LQLGEQPALL IPDAAVQFGS QGNYVHIVDK DSKAQRRTVV LGPADDGRVA VRSGLAAGDK
VVIEGIDGLE DGTAVEIITE EAATKAGA
|
|---|
| |