| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3597 |
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| Symbol | |
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| ID | 6474477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 4050942 |
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| End bp | 4052864 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642732796 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_002029979 |
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| Protein GI | 194367369 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC CCGTGCCCCC GCTGCCCCCG GCGCGTCGCA ACCCCGTCGC CAGTTTCTTC
ATCGGGCTGT GGGACGTCAT GAATTTCACC CGCCGGTTGA TCCTCAACCT GGTGTTCTTC
GGCCTGCTGT TCCTGCTGCT GGTGATGTTC GTCATCGCCG CCGGCATGGG TGCCGGTGCC
AGCAAATCGC TGCAGGACCG CACCACCCTG GTGATCGCGC CGGAAGGCCG CCTGGTCGAG
CAGTTCAGCG CTGACCCGGT CAGCCGCGCA CTGGCCAAAG CGGTGGGCGA CAACGGTGCC
GAAGAGATCC AGCTGCGTGA CCTGCTGCGG GTGATCGAGT CGGCCAAGGA AGACAAGAAG
ATCGAGCGCG TGGTGCTGGA GCTGGACAAG CTGCAGCCGT CGGGCTTCGC GTCGCTGCGT
GAAGTGGCCG CTGCGCTGCA GGACCTGCGT GCATCCGGCA AGCAGCTGGT GGCTTACAGC
GAGAGCATGG GCCAGTCGCA GTACCTGCTG GCCGCGCAGG CCGATGAGGT CTACCTGGAC
CCGATGGGGT CGGTGGTGCT CGAGGGCCTG GGCCGCTACC GCCAGTACTT CCGCACCGGC
CTGCAGGACA AGCTGGGCGT GGACGTGCAC CTGTTCAAGG TGGGCGAGTA CAAGTCCGCC
GCCGAGCCGT ACGTGCTCGA CGCCGCTTCG CCGGCATCCA AGGAAGCCGA TCTGTTCTGG
ATGAACGACG TGTGGCAGCG CTACCTGGGC GACATCGCCA AGGCCCGCCG CCTGGATCCG
GCACAGCTGG CCGCCGGCAT CGACACGCTG CCGGAAGGCA TCTCCGCCGC CGGTGGCGAC
CTGGCCAAGT TCGCCCTGCA GCAGAAGCTG GTGACCTCGC TGAAGACCCG CGAGGAGTTC
GAGGATCTGA TGATCGAGCG CGGCGTGGCT GACGACGATG CCGACGGTGG TTTCCGCAAC
GTCGACTTCG GCAGCTACCT GGGCCAGCTC GATGCGCGCC GCAACCCGGT GGACTCGCGT
CCGCAGGTGG CGGTGGTGGT GGCCGCCGGC GAGATCAGCG GTGGCGACCT GCCGGCCGGC
CGCATCGGTG GCGAGTCGAC CTCGGCACTG CTGCGTGCCG CGCGTGACGA TGAGAACGTG
AAGTCCGTGG TGCTGCGCGT CAATTCGCCG GGTGGTGAGG TGTTCGCCTC CGAGCAGATC
CGTCGCGAAG TGGTGGCCCT GCAGGCTGCC GGCAAGCCGG TGGTGGTGTC GATGGGCGAC
CTGGCCGCCT CCGGTGGTTA CTGGATCAGC ATGAATGCCG ACCGCATCTA CGCCGATCCG
TCGACCATCA CCGGTTCGAT CGGCATCTTC GGCATGGTGC CGAACTTCAG CCGCGCGCTG
GACAAGATCG GTGTGCACAC CGACGGCGTC GGCACGACCC GCTTCGCCGG TGCCTTCGAC
GTCACCCGCC CGATGGACCC GGCGGTGGGC CAGGTCATCC AGTCGGTGAT CAACAAGGGT
TACGCCGACT TCACCGGTCG CGTTGCCGAC GCCCGCAAGA AGCCGGTCGA GGCGGTCGAC
GAAGTGGCCC GTGGCCGCGT GTGGAGCGGT GCGCAGGCCA AGGAACGTGG CCTGGTCGAC
GCCTTCGGTG GCCTGAAGGA TGCGGTGGCC GATGCCGCCA GCCGTGCCAA GCTGGGCAAG
GCCGATGCCT ATCGCGTACG TTACATCGAG AAGGCGGCAA CGCCGTTCGC GCAGTTCGTC
AGCGGCTTCG CTGGCAGCCG TGCCGGTGCC TGGATGCTGT CCGACTCGGG CATGGCGCGG
ATGATGCTGG CGCGTGCGAT GCCGGAAGTG GATACGCAGC TGCGCTTCGT CGAGAACGCG
GCCCGCGACA AGGGCAACGG CGCGCCGGTG AAGGCACTGG CGTACTGCTT CTGCGGGTTC
TGA
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| Protein sequence | MNQPVPPLPP ARRNPVASFF IGLWDVMNFT RRLILNLVFF GLLFLLLVMF VIAAGMGAGA
SKSLQDRTTL VIAPEGRLVE QFSADPVSRA LAKAVGDNGA EEIQLRDLLR VIESAKEDKK
IERVVLELDK LQPSGFASLR EVAAALQDLR ASGKQLVAYS ESMGQSQYLL AAQADEVYLD
PMGSVVLEGL GRYRQYFRTG LQDKLGVDVH LFKVGEYKSA AEPYVLDAAS PASKEADLFW
MNDVWQRYLG DIAKARRLDP AQLAAGIDTL PEGISAAGGD LAKFALQQKL VTSLKTREEF
EDLMIERGVA DDDADGGFRN VDFGSYLGQL DARRNPVDSR PQVAVVVAAG EISGGDLPAG
RIGGESTSAL LRAARDDENV KSVVLRVNSP GGEVFASEQI RREVVALQAA GKPVVVSMGD
LAASGGYWIS MNADRIYADP STITGSIGIF GMVPNFSRAL DKIGVHTDGV GTTRFAGAFD
VTRPMDPAVG QVIQSVINKG YADFTGRVAD ARKKPVEAVD EVARGRVWSG AQAKERGLVD
AFGGLKDAVA DAASRAKLGK ADAYRVRYIE KAATPFAQFV SGFAGSRAGA WMLSDSGMAR
MMLARAMPEV DTQLRFVENA ARDKGNGAPV KALAYCFCGF
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