Gene Smal_3583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3583 
Symbol 
ID6474463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4037028 
End bp4038359 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content70% 
IMG OID642732782 
Productsun protein 
Protein accessionYP_002029965 
Protein GI194367355 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGAAGC AGAACGATTT CTCCGTCGCC AAGGCGGCGC CGGGCGCGGC CACGCGCATG 
CTGGCCGCAC GCGTGCTGGC ACAGGTGTTC ACCCGTGGCC GTTCGCTGAA GGCCGAACTG
GCCTGGGCGC TGCCCAAGCT GGCTGACAGC CGCGACCGCG CACTGCTGGA AGCGCTGTGT
TTCGCGGTCC TGCGCCGTCG CAGCACCTAT GACGCTGCCC TGCAGGGCTG GATGCAGAAG
CCGCTGTCGG CCCGCGATGC CGACCTGCGC ACGCTGCTGA TGGTCGGGTT CGCCCAGCTG
GACGTGCTGG AGCTGCCTGC GCATGCGGCA CTGTCGGCCA CGGTCGATGC CGCGCGCGCG
CTGGGCCGCG AGCGCCAGGC CGGCCTGGTC AACGCAATCC TGCGCCGCGC ACAGCGCGAG
GGTTTCCCGG AGCAGCCCGC ACGCGACGCC TTCCCGGAAT GGTTGGCCGA TGCGGTGGAA
CGCGATTGGC CGGCACAGGC CGACGCGATC TTCAGCGCCA GCCTGCAACC GGCGCCCCTG
TGGCTGCGCG CCAACCGCCA GCAGGGCGGC CGTGACAAGG CACTGGCAGC GCTGGCCGAA
GCCGGCATCG CTGCCGAAGC AAGTACGCTC AGTGCAGATG CGTTGCGGCT GGCGGTTCCC
GTTGCGGTGA ACCAGCTGCC GGGGTTCGCC GAAGGCGCGT TGTCGGTGCA GGACCTGTCG
GCGCAATGCG CGGCAGATGC CCTGGCGCCG GCGTCTGGTG CGCGCGTGCT GGATGCCTGC
GCGGCACCCG GTGGCAAGTC CGCGCATCTG CTTGAACGCG ATCCGAGCCT GCGCCTGCTG
GCACTGGATA TCGATGCCCG CCGCCTGGCG CGCGCACGCG ATACCTACAT CCGCACCGGC
GTGGGTGAGC ACGTACAGAC CCTGGCCGCA GATGCCAGTG ATCCCGGTTC ATGGTGGGAT
GGCGTGCCGT TCGACGCGAT CCTGCTGGAT GCGCCGTGCT CGGCCACCGG CGTGATCCGC
CGCCAGCCGG ATGTGATGTT CCACCGCCGT GCCGAGGACA TCGACGCGCT GGTCGGCGTG
CAGGCGCGCT TGCTGGAAGC CTGCTGGTCG ATGCTGCGCC CGGGCGGCGT GCTGCTGTAT
GCCACCTGTT CGATCCTGCG CGCCGAGAAC ATCGATCAGG TGCGCGCGTT CCTGAAGTGG
CATCCGGATG CCGTGGCGCA GCCGCTCGGC GACGCGTTCG GCGTGGATTG CGAAGGGGTG
GCACGCCAGC GGCTGCCGGG TGAAAACGAC GCTGACGGTT TCTTCTACGC GCGTCTGCTA
AAAACAGCCT GA
 
Protein sequence
MSKQNDFSVA KAAPGAATRM LAARVLAQVF TRGRSLKAEL AWALPKLADS RDRALLEALC 
FAVLRRRSTY DAALQGWMQK PLSARDADLR TLLMVGFAQL DVLELPAHAA LSATVDAARA
LGRERQAGLV NAILRRAQRE GFPEQPARDA FPEWLADAVE RDWPAQADAI FSASLQPAPL
WLRANRQQGG RDKALAALAE AGIAAEASTL SADALRLAVP VAVNQLPGFA EGALSVQDLS
AQCAADALAP ASGARVLDAC AAPGGKSAHL LERDPSLRLL ALDIDARRLA RARDTYIRTG
VGEHVQTLAA DASDPGSWWD GVPFDAILLD APCSATGVIR RQPDVMFHRR AEDIDALVGV
QARLLEACWS MLRPGGVLLY ATCSILRAEN IDQVRAFLKW HPDAVAQPLG DAFGVDCEGV
ARQRLPGEND ADGFFYARLL KTA