| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3571 |
|---|
| Symbol | |
|---|
| ID | 6474451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 4022438 |
|---|
| End bp | 4023844 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642732770 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002029953 |
|---|
| Protein GI | 194367343 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.489083 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATGC CACGCGCTCA ACGCCCACAG GTACTGGATC TGATCGCTCA GCTGGCCCCC
GGCCAGCCGC TACCTGCCGC GGCGCTGGCC GAGCGTCTGG GGGTGGACCG GATGGCGCTC
AGCCGGCTGG TGGCCGCCAG TGGCCCGCAG GTGGTGCGCA TGGGCAGCAC CCGGGCAACC
GCCTATGCGC TGCGGCGGCC CACCCGGGTC GGCAGCGAAT GGCCGCTGTA CCGGCTGCGC
GAAGATGCGA CGCTGGAGGA GCTGGGGCGG GTAATTGCGC TGGTAGGAGG CGGCTTCCAC
GTCGATGCCG GGCCTGACTG CCCGAACCTG CGACGCGCGC CCGAAGGTGA CGTTGCCGCC
TTCTTTCCTG ACTTGCCGTG GTACCTGGAT GACCTGCGAC CGCAGGGCTT TCTTGGTCGC
AGCTTCGCCC ATGGCCGTGC GCAGGCGCTC GGCCTGCCGA AGGACCTCAA GAGCTGGCAA
CCGGACGATG TGTTGATGGT CCTGGTAACC GCTGGCGGGA CTGAAGCGGG CGATCTGCTG
CTCGGTGCCG CCGCCGTGGA GGCGGCGATG GAGACGTTGC AGGTGCCGAT CGATCGGGTT
GCGGCCGACG ATCGTCTTGC ACATTATCGC GAGCGTGCGC GTGCTGCGCT GGACGGAGAG
GACGTGGGCT CCTCGCCGGG TGGCGAGCAA CCCAAGTTCA CCGCCACCGT AGAGGCCTAC
GGCAGGCGCC GCTCGGTCCT GGTCAAGTTC GCGCAACCCG ATGAAGGCGC CGCCGCCCAG
CGTTGGAGCG ATCTGCTGGT CTGCGAACAT CTGGCGCTTG AGGCCCTGCG CGAGTCCGGA
CAAGCCGCGG CGTCCAGCGA ACTGCTGCAG TCGCCCACGC ACACCTTCCT GGAAATCGAG
CGCTTCGACC GCACGCCCGA TCTGCTGGGG CGGCGAGGCC TGGTCTCGCT GCTGTCGCTA
TCGTCAGCGT TCACCGGCGA GGTCACCCCA GCGTGGCCGG TTGCAGGCGC CGAACTGCGT
GATCAAGGCT GGCTGACGGC CGACACCGTG CAGGCGATGG GCCGACGCCA CGCGTTCGGG
CGGCTGATCG GCAACAGCGA CATGCACCAC GGCAACATCG CCTTCCACTT CATTGATCGC
GGCCCGCTGC CATTGGCGCC GGTCTACGAC ATGCTGCCGA TGTCGCTGGC GCCGTCAAAG
CTGGGCGTGT TGCGCGCGGA CGAGCCGCTG TCGCCGGTCG CGCCGCTGGG CAGTGGTGAT
CTGCAGCATC TGCGCTGGGC GGCACCGGTG GCTGAAGCAT TCTGGCAGTG TGTGGCTGTT
GACGGGCGGA TCCAGTCGCC AGCAATGCGG TCATTGGCGG GGGCGAACGC CGAGCGGGTG
CGGGAGATGG GCGAGCGGTT TGGGTGA
|
|---|
| Protein sequence | MHMPRAQRPQ VLDLIAQLAP GQPLPAAALA ERLGVDRMAL SRLVAASGPQ VVRMGSTRAT
AYALRRPTRV GSEWPLYRLR EDATLEELGR VIALVGGGFH VDAGPDCPNL RRAPEGDVAA
FFPDLPWYLD DLRPQGFLGR SFAHGRAQAL GLPKDLKSWQ PDDVLMVLVT AGGTEAGDLL
LGAAAVEAAM ETLQVPIDRV AADDRLAHYR ERARAALDGE DVGSSPGGEQ PKFTATVEAY
GRRRSVLVKF AQPDEGAAAQ RWSDLLVCEH LALEALRESG QAAASSELLQ SPTHTFLEIE
RFDRTPDLLG RRGLVSLLSL SSAFTGEVTP AWPVAGAELR DQGWLTADTV QAMGRRHAFG
RLIGNSDMHH GNIAFHFIDR GPLPLAPVYD MLPMSLAPSK LGVLRADEPL SPVAPLGSGD
LQHLRWAAPV AEAFWQCVAV DGRIQSPAMR SLAGANAERV REMGERFG
|
|---|
| |