Gene Smal_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3562 
Symbol 
ID6474441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4007711 
End bp4008130 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID642732760 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_002029944 
Protein GI194367334 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.626821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.684238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTG ATATTGAATC GCTCAGCCTT CGGGAGCTGG GCGCCTTGGT GGTTGCCGCT 
GAACAGCGGA AACAGCTGAT TTCCAGCCGC CGTCCGGCCA GTGCGGTACG GCGGATGTTG
AAGGCCGCAG CAGCAGAAGC GGGGTATACC CTCGAAGAGC TGTTCGGCGG AGAGGCGAAC
GAAGAGGCCG CTCCCCGCAG GAAACCGGCA CGGCGCAGAA CCGGGAAAGT GGCTGCCAAG
TACCGTGACC CGGAGTACAA GCGCCTGACC TGGTCCGGCC GCGGGCGTAT GCCGCGCTGG
CTGGCGTCCA AGGTGCAGAA GGGCCACAAG GTGACCGACT TCCTGATTCC CGGCCTGGCC
CGGCCGACGG CGCGCAAGAG CAGCCCGATC GGCAAGCGCA CGGTTTTCAA GAAGGATTGA
 
Protein sequence
MTIDIESLSL RELGALVVAA EQRKQLISSR RPASAVRRML KAAAAEAGYT LEELFGGEAN 
EEAAPRRKPA RRRTGKVAAK YRDPEYKRLT WSGRGRMPRW LASKVQKGHK VTDFLIPGLA
RPTARKSSPI GKRTVFKKD