Gene Smal_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3558 
Symbol 
ID6474437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4004743 
End bp4005636 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content66% 
IMG OID642732756 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002029940 
Protein GI194367330 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACTATC TCTTCCCGAT CCTTGCGTGC CTGCTATGGG GCGCGAACAC CATCGTCACC 
AAGCTTGCCT CCGGTTCAGT GGGCCCGATC GACATCGGCT TCTTCCGCTG GCTGGTGGCC
GCCATCCTGC TGCTGCCGTT TGCCCTGCCA CGCCTGTGCC AGAATCTGCC GACCGTACGT
GCAAACCTCG GCCGCTTCCT GGTGCTGGGG TGCCTGGGCG GCGTGATGTA CCAGTGCCTG
GCCTACTACG CGGCACACTT CACCTCGGCT ACCAACATGG GGGTGATCCA GGCCCTGATC
CCGCTGATCG CGTTGGCGCT GTCACGCGTG TTCATGGGCC ATCCGGTACG TGGCACCTCC
ATCCTCGGAG CGGTGATCTC CAGCATCGGC GTGGTTGCGG TGGTGTCCCA GGGCGACCTG
GCGCGGTTGG CTACGCAGGG CCTGAACCGC GGTGATGCGA TCATGCTGGT CGGCGCGTTG
GCCTTCGCCG CCTACAACGT GCTGATGCAA CGCTGGAAGA TCCCGCTGTC GGTGCTGGAG
TCACTGTTCC TGCAGGCCAC GGCGGCGTCG CTGATCCTGC TACCGTTGCA GCTGCTGATC
GGGACCGGGG TGGACAACCT GACGGCGGTC GGCTGTATCG GCTTCGCGGC GGTCTGTGCA
TCCATTCTCG CGCCGCTGAC CTGGATGACG GGCCTCTCCC GGCTGGGCGC AGCGCGTGTT
TCCGGCTTCT TCAACCTGGT GCCGATCGTC ACCGCAGCGT TGGCGGTGAT GCTGCTGGGC
GAATCGCTCA GTGGCTGGGT ACTGGGCGGT GGCCTGCTGG CGGTGTCCGG CGTGGTGTTC
GCTGAGTACA GCGCCAGGCG CGCCGCTGCA GTGTCGAGCG AGCAACCCGC ATAG
 
Protein sequence
MNYLFPILAC LLWGANTIVT KLASGSVGPI DIGFFRWLVA AILLLPFALP RLCQNLPTVR 
ANLGRFLVLG CLGGVMYQCL AYYAAHFTSA TNMGVIQALI PLIALALSRV FMGHPVRGTS
ILGAVISSIG VVAVVSQGDL ARLATQGLNR GDAIMLVGAL AFAAYNVLMQ RWKIPLSVLE
SLFLQATAAS LILLPLQLLI GTGVDNLTAV GCIGFAAVCA SILAPLTWMT GLSRLGAARV
SGFFNLVPIV TAALAVMLLG ESLSGWVLGG GLLAVSGVVF AEYSARRAAA VSSEQPA