Gene Smal_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3543 
Symbol 
ID6474422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3985808 
End bp3986482 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID642732741 
ProductTranscriptional regulator TetR 
Protein accessionYP_002029925 
Protein GI194367315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.32802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGT TCATCGCGCA CCTGCAGACA CCGGCGCGAC GGCGGGCGGC TGAGACACGC 
AGCGAACAGA CCCGGACCCG GTTGCTGCAG GCTGGACTGC AGTTGTTCAG TGCACTGGGA
GTGGAAGGCG TGCGCACCCG TCAACTGGTG GATATTGCAG GCTGCAGCCA ATCCGCCATT
CCCTACCACT TCGGCGGCAA GCTGGAACTG TATGCCGCCG TACTCAGGCG CGCCGCACAG
GCCATCGCTG AACAGCTGCC GCTGCCCGCG GTACCACCCG CCGGTCCACG CCAGGCCGCA
CAGCAGCTGC AGCGGCTGAT GCGGGCATTC GTGCACGCGC TGCTGGCTGC ACCCGATGCA
AGTGCGCGGA CCCTGTTGCT GGCCCGCGAG CAGATCCAGC CGACGGCCGC GTTCGCCCGT
GTCCACCATG AGCTGTTCGG GCCTCTGCAT GCGGCATTGG CCGAATGCGT CGCTCATCTT
CGAGGCGCCG ATGCATCCAG CATGGAGACG GTGCTGCGTA CCCACGCACT GCTCGGCCAG
GCGATCGTCT TTGCTGTCTC GCACGGCGCC CTGCAGGCGC GGCTTGGAGA AACGGCAGCG
GCAGCCGACG TGGAGACAAT TGCAGCCATC GTCGGCGGTA TGGCTCTGGC CGCAGCCCGG
GCGGCGCCAG CCTGA
 
Protein sequence
MPEFIAHLQT PARRRAAETR SEQTRTRLLQ AGLQLFSALG VEGVRTRQLV DIAGCSQSAI 
PYHFGGKLEL YAAVLRRAAQ AIAEQLPLPA VPPAGPRQAA QQLQRLMRAF VHALLAAPDA
SARTLLLARE QIQPTAAFAR VHHELFGPLH AALAECVAHL RGADASSMET VLRTHALLGQ
AIVFAVSHGA LQARLGETAA AADVETIAAI VGGMALAAAR AAPA