| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3521 |
|---|
| Symbol | |
|---|
| ID | 6474400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3958276 |
|---|
| End bp | 3959988 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642732719 |
|---|
| Product | dihydrolipoamide acetyltransferase |
|---|
| Protein accession | YP_002029903 |
|---|
| Protein GI | 194367293 |
|---|
| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0511] Biotin carboxyl carrier protein |
|---|
| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.541134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAA TCAAGGAAGC ACTTGTCCCC GATATCGGTG ACTACAGCGA TATCCCGGTA
ATCGAGGTGC TTGTCGCCGT CGGCGACACG GTCAAGAAGG ACCAGGGCCT GGTGACGCTG
GAAAGCGACA AGGCGACCAT GGAAGTGCCG TCGGCCGTGG CCGGCGTGGT CAAGGAGATC
AAGGTCAAGG TCGGTGACAC CCTGTCCGAG GGCAAGGTCG TGGCGCTGAT CGAAGTGGCT
GAAGGCGAGG CTGCCAAGCC GGCTGCTGCC GCCCCGGCAC CGGCCAAGGC CGCAGCGCCG
GCCGCTGCCA CCCAGAGCAC GCCGGCCCCG GCCGCAGCTG CGCCGGCCGC TCCGGCTGCC
AGCGGTGGTG CGGTTGAAGC GCTGGTGCCG GATATCGGCG ACTATTCCGG CATTCCGGTC
ATTGAAGTGC TGGTCGCCGT CGGCGACACG GTCAAGAAGG ACCAGGGCCT GGTCACGCTG
GAAAGCGACA AGGCCACCAT GGAAGTGCCG TCGTCGGTGG CTGGCGTGGT CAAGGAACTG
AAGGTCAAGG TCGGCGACAA TCTGTCGCAG GGCAATGTGG TCGCCATCAT CGAGGCCGAG
GGCGCTGCCG TGCCGGCGCC GACCAAGGCA GCCGCTGCTG CCGCTCCGGC TGCCGCCGAG
ACCGCCACCA AGGTCGAGCC GGTCGCTGTG CCGGCGCAGC CGGACAAGCT GGCGGCCCGC
GAGATCGCCT CGGCCGGTAC CCCGACCAGC CCGCCGGTGC AGTTCAACGC CGATGGCGTG
CTGCCGGCCA AGGTGCCGTA TGCCACCCCG GCGGTGCGTG TGTTCGCCCG CGAACTGGGC
GTGGACCTGC TGCAGATCAA CGGCACTGAG AAGGGTGGCC GCATCACCAA GGGTGACGTG
CAGAAGTTCG TCAAGGCCGC ACTCAGCGGC GGCGTGCCGG CTGCCGGCGG TGCTGCTGTC
GCTGCCGGGG GTGGCCTGAA CCTGCTGCCG TGGCCGAAGG TCGACTTCAG CAAGTTCGGC
GACGTTGAAG TGCAGCCGTT GTCGCGCATC AAGAAGATTT CCGGCGCGAA CCTGGCCCGC
AACTGGGCGA TGATCCCGCA CGTCACCCAG TTCGAACAGG CCGACATCAC CGACCTGGAA
GGCCTGCGCG TGGCGCTGAA CAAGGAAAAC GAGAAGGCCG GCATCAAGCT GACCATGCTC
GCCTTCCTGA TCAAGGCCAG TGCCGCGGCG CTGAAGAAGT TCCCGGAGTT CAACGCCTCG
CTCGATGCCA GCGGCGAGAA CCTGACCCTG AAGAAGTACT TCAACATCGG CTTCGCCGCC
GACACCCCGA ACGGTCTGGT CGTGCCGGTC ATCCGCGACG TGGACAAGAA GGGCGTGGTG
CAGATCGCGC AGGAAACCGG CGAACTGGCC AAGAAGGCGC GCGACGGCAA GCTGGGCCCG
GCCGACATGA GCGGCGGCTG CTTCTCGATC AGCTCGCTGG GCGGCATCGG CGGCACCGCG
TTCACCCCGA TCGTCAATGC ACCGGAAGTG GCCATCCTCG GCGTCTCCAA GTCGTCCATC
CAGCCGGTCT GGAACGGCAA GGAATTCGCA CCGAAGCTGA TGCTGCCGCT GTCGCTGAGC
TACGACCACC GCGTCATCGA CGGCGCCCTG GCCGCACGCT TCACCACGTA CCTGTCGCAG
GTACTGGCCG ACATGCGCCG CGTGCTGCTG TAA
|
|---|
| Protein sequence | MAEIKEALVP DIGDYSDIPV IEVLVAVGDT VKKDQGLVTL ESDKATMEVP SAVAGVVKEI
KVKVGDTLSE GKVVALIEVA EGEAAKPAAA APAPAKAAAP AAATQSTPAP AAAAPAAPAA
SGGAVEALVP DIGDYSGIPV IEVLVAVGDT VKKDQGLVTL ESDKATMEVP SSVAGVVKEL
KVKVGDNLSQ GNVVAIIEAE GAAVPAPTKA AAAAAPAAAE TATKVEPVAV PAQPDKLAAR
EIASAGTPTS PPVQFNADGV LPAKVPYATP AVRVFARELG VDLLQINGTE KGGRITKGDV
QKFVKAALSG GVPAAGGAAV AAGGGLNLLP WPKVDFSKFG DVEVQPLSRI KKISGANLAR
NWAMIPHVTQ FEQADITDLE GLRVALNKEN EKAGIKLTML AFLIKASAAA LKKFPEFNAS
LDASGENLTL KKYFNIGFAA DTPNGLVVPV IRDVDKKGVV QIAQETGELA KKARDGKLGP
ADMSGGCFSI SSLGGIGGTA FTPIVNAPEV AILGVSKSSI QPVWNGKEFA PKLMLPLSLS
YDHRVIDGAL AARFTTYLSQ VLADMRRVLL
|
|---|
| |