Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3501 |
Symbol | |
ID | 6476780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3938370 |
End bp | 3939095 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642732699 |
Product | ABC transporter related |
Protein accession | YP_002029883 |
Protein GI | 194367273 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.667044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACATGC TCGAAATGCG TTCGGTCGCC AAAGTCTTCC GCACCGAACA GGTGGAAACC CACGCACTGC GCTCACTGGA ACTGCAGGTC AAGGAAGGCG AGTTCGTCGC CGTCACCGGC CCGTCCGGCT CCGGCAAGAC CACCTTCCTC AACATCGCCG GCCTGCTGGA AACCTTCACC AGCGGCACCT ACATGCTCGA CGGCCAGGAT GTGAGCAAGC TCGGCGACGA TGCGCGCAGC CGCCTGCGCA ACCAGAAGAT CGGCTTCATC TTCCAGGGCT TCAACCTGAT CCCCGACCTG AACCTGTTCG ACAACGTCGA CGTGCCGCTG CGCTATCGGA AGATGAGTGC CAACGAGCGC CGCGAGCGCA TCGAGAAGGC ACTGAGCCAG GTCGGCCTCG GCTCGCGCAT GAAGCACTAC CCGAACGAAT TGTCCGGCGG CCAGCAGCAG CGCGCGGCCA TCGCCCGTGC ACTGGCCGGC AGCCCGCGCC TGCTGCTGGC CGACGAACCG ACCGGCAACC TGGACACGCA GATGGCTCGC GGCGTGATGG AACTGCTGGA GGAGATCAAC GCTGCCGGCA CCACCATCGT GATGGTCACG CACGATCCGG AACTGGCCGC ACGCGCGCAG CGCAACGTGC ACATCGTCGA CGGCCAGGTG ACCGACCTGG TGCGGGAGCC GGTGCTGGCC ACCCCCCCGC GCCACATCGT CGCCGTCAAC GAGTGA
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Protein sequence | MYMLEMRSVA KVFRTEQVET HALRSLELQV KEGEFVAVTG PSGSGKTTFL NIAGLLETFT SGTYMLDGQD VSKLGDDARS RLRNQKIGFI FQGFNLIPDL NLFDNVDVPL RYRKMSANER RERIEKALSQ VGLGSRMKHY PNELSGGQQQ RAAIARALAG SPRLLLADEP TGNLDTQMAR GVMELLEEIN AAGTTIVMVT HDPELAARAQ RNVHIVDGQV TDLVREPVLA TPPRHIVAVN E
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