| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3500 |
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| Symbol | |
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| ID | 6476779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 3937057 |
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| End bp | 3938334 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642732698 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002029882 |
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| Protein GI | 194367272 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.226045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCG ACACCTCCGC ACAGGACCAG ATCGTTTCCT CCGCCCCGGC AGGCACCACC
CGCGCCTCCT GGCAGCGCTA CCGCTGGCCG GCGCTGGGCG CCATCGCACT GCTGGCCGGC
ATTGGCTGGG CGGTACATGC CTGGTCCAAT GCCAGCCGCT CCTTCGACAG CAGCCGCGTG
CGCATCGCCG AAGTGAAGCG TGGCGACCTG GTCCGCGACA TTGCTGCCGA CGGCCGCGTG
ATCGCCGCCA ACAGCCCGAT CCTGTATGCC ATCTCGGCCG GTACCGTGGA CCTGAAGGTG
GTCGCCGGCG ACGTGGTCAA GAAGGGCCAG GAACTGGCAG TCATCGACAG CCCGGAACTG
CGCAGCAAGC TGGCCCAGGA ACAGGCCACC CTGGCCGGCC TGGAGGCGGA GTCGAGCCGC
GCCGCACTGG ACGCCACCCT GGCCCGCGCC AAGTCGCGCA AGGAAACCGA TCAGGCCACC
ATTGAACGGC AGGCCGCCGA CCGTGATCTG CAGCGCTACC AGCGCGGCTA TGACGGCGGC
GCGGTGCCGC AGATCGACCT GGCCAAGGCC AAGGACTCGC TGAAGAAGGC CGACATCACC
CTGGCCAACG CCACCACCGA TGCACACCTG CAGAGCCAGG GCGCGGACCT GGACGCCCGC
AACAAGCGTC TGCTGGCCGA TCGCCAGAAG GCCGTGGTGG CCGAGGTGCA GCGCCAGGTC
GATGCGCTGA CCCTGCGCGC ACCGTTCGAC GGCCAGGTCG GCCAGGTGCA GGCCATCCAG
TCCACCAACC TGGCCGCCAA CGCGCCGGTG CTGGGCGTGG TCGACCTGTC CAAGTTCGAA
GTCGAGATCA AGGTGCCGGA GAGCTTCGCC CGCGACCTGG CGATCGGCAT GCCGGCGCAG
CTGACCGGCG GCAACGGCAA GCCGTTCCCG GGCGAGATCA GCGCGGTGTC GCCGGAAGTG
GTCAACGGCG AGGTCAATGC CCGCGTGCGC TTCGCCAGCG CGCAGCCGGA AGGCCTGCGC
CAGAGCCAGC GGATGTCGGT GCGCGTGCTG CTCGATACCC GCAAGGACGT GCTGAAGGTC
GAGCGCGGCC CGTTCGTCGA ACAGGGCAAC GGCATCGCCT ACGTGATGGA TGGCCGCACC
GCAGTGCGCC GCCCGGTGGA ACTGGGCGTC AGCAGCCTGG GCGAAGTGGA AATCAAGTCG
GGCGTGCAGC CGGGCGACCG CATCGTGGTC TCCGGCAGCG ACCTGTTCAA GGACGCCGAA
CGCGTCTCCG TCAACTGA
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| Protein sequence | MIRDTSAQDQ IVSSAPAGTT RASWQRYRWP ALGAIALLAG IGWAVHAWSN ASRSFDSSRV
RIAEVKRGDL VRDIAADGRV IAANSPILYA ISAGTVDLKV VAGDVVKKGQ ELAVIDSPEL
RSKLAQEQAT LAGLEAESSR AALDATLARA KSRKETDQAT IERQAADRDL QRYQRGYDGG
AVPQIDLAKA KDSLKKADIT LANATTDAHL QSQGADLDAR NKRLLADRQK AVVAEVQRQV
DALTLRAPFD GQVGQVQAIQ STNLAANAPV LGVVDLSKFE VEIKVPESFA RDLAIGMPAQ
LTGGNGKPFP GEISAVSPEV VNGEVNARVR FASAQPEGLR QSQRMSVRVL LDTRKDVLKV
ERGPFVEQGN GIAYVMDGRT AVRRPVELGV SSLGEVEIKS GVQPGDRIVV SGSDLFKDAE
RVSVN
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