Gene Smal_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3498 
Symbol 
ID6476777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3934129 
End bp3934560 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID642732696 
Productputative signal-transduction protein with CBS domains 
Protein accessionYP_002029880 
Protein GI194367270 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.156756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.37398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC GCGAACTCCT GCAATCCAAG AAAGAAGCTG TCATCACCAT CGACGCCGAA 
GACACCATCG GTGCCGCCGC CCACAAGATG AGCGCGAACA AGATCGCTGC GCTGGTGGTG
ACGAAGGACG ATGCCCCGGT TGGCATCATT TCCGAGAAGG ACATCGTGCG TACCCTGGCC
GACGACGGCC CGCAGGCCGG CCGACGGGTG ATCTCCAGCC TGCCGTCCAC CGGTCTGGAA
GGCATTGCGC CGGAGGCCAC CCTGAAGCAG GCCATGTCGT TGATGACGTA CTCGCGGCGC
CGTCATCTGA TGGTCACCGA AGGTACCCTG CTGGTGGGCA TCCTCAGCCT GGGCGACATC
GTGAAGAACC TGCTGGGTGA GCTGGAACTG GAAAAGGCCG TGCTGCAGGA CATCTACATG
GCCGCCCACT GA
 
Protein sequence
MNVRELLQSK KEAVITIDAE DTIGAAAHKM SANKIAALVV TKDDAPVGII SEKDIVRTLA 
DDGPQAGRRV ISSLPSTGLE GIAPEATLKQ AMSLMTYSRR RHLMVTEGTL LVGILSLGDI
VKNLLGELEL EKAVLQDIYM AAH