Gene Smal_3495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3495 
Symbol 
ID6476774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3931789 
End bp3932901 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content66% 
IMG OID642732693 
ProductPyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_002029877 
Protein GI194367267 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.100573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.445859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGC GTGAATGGGT GGCCGCCGCC ATCCGCAAGA TCGAAGCCGA TTTCAACCGT 
TCCGCCGATA CCCACCTGAT CCCGTTGGCG CTGCCCGGGT TCGATGGCAT CGATGTGTAC
CTGAAGGATG AATCGAGCCA TCCCACCGGC AGCCTCAAGC ACCGGCTGGC CCGCTCGCTG
TTCCTGTATG CGTTGACCAA CGGCTGGTTG CGCGAGGGGC GGCCGGTGAT CGAGGCATCC
AGCGGCTCGA CCGCGGTGTC CGAAGCCTAT TTCGCGCGCC TGCTGGGCCT GCCATTCATC
GCGGTGATTC CGGCCACGAC CTCGCCGGAG AAGATTGCCG CGATCGAGTT CCATGGTGGC
CGCTGCCATC TGGTCGAGCG TGCCTGTGAC CTCAACTGTG ATTCGGAAAA GCTCGCCCGC
GACACCGGCG GCCACTTCAT GGACCAGTTC ACCTACGCCG AGCGTGCCAC CGACTGGCGC
GCCAACAACA ACATCGCCGA ATCCATCTTC AAGCAGATGG CCGAAGAGCC CAGCCCGGTT
CCGGAGTGGA TCGTGTGCAG CCCCGGCACC GGCGGTACCG CGGCCACGCT GGGCCGCTAT
GTCAGCTACC GCCGGCATGA CACCCGCATC CTCTGCGCGG ACCCGGAAGT GTCGGTGTTC
TTCGATGGCT ATCAGGCTGC CGTGGCCGGC CAGCAGGACT GGCGTGGCCT GACCTGCAGC
GGCGGTTCGC GCGTGGAAGG CATCGGCCGG CCGCGGGTGG AACCGAGCTT CATTCCGACC
AGTGTGGATG CGATGGTGAA GGTGCCCGAT GCACTGAGCC TGGCCGCGAT GCGCCATGTC
AGTCGCCAGC TCGGTCGACG CGTGGGTGGC TCCACCGGTA CCAATTTCAT CGGCGTGCTG
CAGGCCGCGC AGTGGATGCG CGAGGCCGGC CACCAGGGCA GCATCGTCAG CATCCTGTGC
GACAGCGGCG AGCGCTATGC GCAGAGCTAC TACGACCCGG CGTGGTATGC ACGGCAGGGT
ATCGATGTGC AGGGGGCCGA CGCGCAGCTG GCTGCTGCGG TAGCCGGGCA GGGCCTGCCG
CAACTGCCGT GGTGCAGCTT GGAAGCACTG TAG
 
Protein sequence
MSQREWVAAA IRKIEADFNR SADTHLIPLA LPGFDGIDVY LKDESSHPTG SLKHRLARSL 
FLYALTNGWL REGRPVIEAS SGSTAVSEAY FARLLGLPFI AVIPATTSPE KIAAIEFHGG
RCHLVERACD LNCDSEKLAR DTGGHFMDQF TYAERATDWR ANNNIAESIF KQMAEEPSPV
PEWIVCSPGT GGTAATLGRY VSYRRHDTRI LCADPEVSVF FDGYQAAVAG QQDWRGLTCS
GGSRVEGIGR PRVEPSFIPT SVDAMVKVPD ALSLAAMRHV SRQLGRRVGG STGTNFIGVL
QAAQWMREAG HQGSIVSILC DSGERYAQSY YDPAWYARQG IDVQGADAQL AAAVAGQGLP
QLPWCSLEAL