Gene Smal_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3483 
Symbol 
ID6476762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand+ 
Start bp3919305 
End bp3919907 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID642732681 
ProductLipocalin family protein 
Protein accessionYP_002029865 
Protein GI194367255 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.398665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.662911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA TCCGCCCGCT CTGCGCCGTG CTGCTGGCCC TGTCCCTGGC GGGCCCCGCC 
ATGGCCACCA GTGAGCCGCC GTCGCCCCGT GCCAGCGCAG CGCGCGCTTC CGCCCTGGAC 
GAACCGATCG ACCTGAAGCG TTTCATGGGC ACCTGGTACG TGATCGGCCG CGTGCCGAAC 
TTCATCGAAC GCGGCCATGT CGCCAGCGTC AACCAGTACG AATTGCGCGA CGAACACAAG 
GTCGGCATCA CCTACCGCTA CCGCGATGGC TTCGGCGAAC CCCTGCAGGA AGTCCGCGCC 
CGTGCCAGCG TCGACCCGGA CAGCGGCAAC CACGGCTGGC GCACCTGGTT CTATCGCGTG 
GTGCCTACCC ATTCGCGCGT GCTGGAAGTC GCCCCGGACT ACTCATGGGC GCTGATCGGC 
TACCCGGGCC GCGAGATGGC CTGGATCTTC TCGCGTACGC CGGACATGGA CAAAGCCCTG 
TACAAGGAGC TGGCCGAGCG CCTGCGTGAC GAGTACGGGG TGAACACCGA CAAGCTCAAG 
CGCGTGCCGC AGCATCCCGA GCAGGTCGGC AAGCTGGGCT ACGAAGTGCC GAACGAGCGT 
TGA
 
Protein sequence
MTSIRPLCAV LLALSLAGPA MATSEPPSPR ASAARASALD EPIDLKRFMG TWYVIGRVPN 
FIERGHVASV NQYELRDEHK VGITYRYRDG FGEPLQEVRA RASVDPDSGN HGWRTWFYRV 
VPTHSRVLEV APDYSWALIG YPGREMAWIF SRTPDMDKAL YKELAERLRD EYGVNTDKLK 
RVPQHPEQVG KLGYEVPNER