Gene Smal_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3452 
Symbol 
ID6476731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3885768 
End bp3886253 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content70% 
IMG OID642732650 
Productrod shape-determining protein MreD 
Protein accessionYP_002029834 
Protein GI194367224 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.973834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC TGCGCGACAA CCCCTGGGTG CTGCCGGCCA GCCTGGTAGT GGCCCTGCTG 
CTGGGCCTGC TGCCGTTGCC GGCGCTGCTG CAGCCGCTGC GTCCGTACTG GCTGGCGCTG
GTGCTGGCGT ACTGGGTGAT CGAAGCGCCC GAGCGCGTCG GCCTGGGCAT CGCCTTCGCC
AGTGGCGTCA TCGCCGATCT GCTGTACGGC GGCGTGCTGG GAGAACAGGC GCTGCGGCTG
GTGATGCTGG CCTTCATCCT CCAGCGCTTC CGCGCCCGCA TCCGCTTCTT CCCGATGTCG
CAGCAGATGC TCGCCATTGG CGGCCTGCTG TTCAACGACC GCATCGTCAG CGCGCTGGTC
CACATCGTGG TGGATGAGCC GACCCTGCCG TGGTCGTACT GGTGGGCGCC GCTGCTGGGC
ATGGGCCTGT GGCCGCTGGT GTTCGTGCTG CTGGACGCGG TGCGTTTCGG CAAGCGCGGG
CGCTGA
 
Protein sequence
MSRLRDNPWV LPASLVVALL LGLLPLPALL QPLRPYWLAL VLAYWVIEAP ERVGLGIAFA 
SGVIADLLYG GVLGEQALRL VMLAFILQRF RARIRFFPMS QQMLAIGGLL FNDRIVSALV
HIVVDEPTLP WSYWWAPLLG MGLWPLVFVL LDAVRFGKRG R