Gene Smal_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3450 
Symbol 
ID6476729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3882580 
End bp3883692 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content65% 
IMG OID642732648 
Productrod shape-determining protein RodA 
Protein accessionYP_002029832 
Protein GI194367222 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.921865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TCCTGCGCTG GGCCGGCGAC ATGCTGCGCC GCTTCTTCAG CACGCTGGAC 
TGGGTGTTGT GCCTGGCGCT GGGCGCGTTG ATGGTGATCG GTCTGGCGAC ACTCAAGAGC
GCGGGCGGCG ACAGCCTGGT GATGGCCCAG GGCGCGCGTT TCGCGGTGGG CATGGCCGCG
CTGTGGGGCA TCTCGCGGGT ACCGATACTG CGTATCCGCT CGGCCACGCC GATGATCTAT
GCGATCTCGA TGATTCCGCT GCTGGCAGTG TTCGTGCTTG GCACAGGCAA GTACGGTCGG
CAGTGGCTGG ACCTGAAATT CTTCTATCTG CAGCCGGCCG AACTGCTGAA GGTCAGCCTG
CCGATGATGG TGGCCTGGTA CCTGCACAAG ATGCCGCTGC CGCCGCGCTT CAATACCGTG
CTCGTGTCCC TGGTCATCAT AGGTGTGCCG ACCGGCCTGG TGATGCTGCA GCCCGACTTC
GGCACCGGCG TGCTGATCGC TGCCAGCGGC GTGTTCGTGC TGCTGCTGGC CGGCTTGCCG
TGGTGGTGGG TTGGCCTGGG TGTGGGTGGT GTGGCCGCGG TCGCACCGGT GGCCTGGTTC
TGGCTGCTGC GGCCCTACCA GAAGGACCGC ATCATGATGT TCCTGGACCC GGAGATGGAT
GCGCTGGGTG CTGGCTGGAA CATCATCCAG TCGAAGATCG CGATCGGTTC TGGCGGCTTC
GATGGCAAGG GCTGGGGCGA GGGCTCGCAG TCGCACCTGA ACTTCATTCC CGAGCAGACC
ACCGACTTCG CGTTCTCGGT ACTGAGCGAG GAATTCGGCT GGATCGGCGT GGCCACCGTG
CTGGCGCTGT ACCTGGTGGT GATCGGTCGC TGCCTGTGGA TCGCCAGCCA GTCGCGCGAT
TCCTATTCGC GGCTGCTGGC CGGTGCCACC GGGCTGGCGT TCTTCGTCTA CGTGCTGGTC
AACGGCGGGA TGATTTCCGG ACTGCTGCCG GTGGTGGGCG TGCCGATGCC GCTGATCAGC
TACGGCGGTA CGTCGGCGGT TTCGCTGCTG GCCGGCTTCG GCTTGGTGAT GGCGGTACGC
AGCCACAATC CGGTACACGG CGGCTACGGG TAA
 
Protein sequence
MKVFLRWAGD MLRRFFSTLD WVLCLALGAL MVIGLATLKS AGGDSLVMAQ GARFAVGMAA 
LWGISRVPIL RIRSATPMIY AISMIPLLAV FVLGTGKYGR QWLDLKFFYL QPAELLKVSL
PMMVAWYLHK MPLPPRFNTV LVSLVIIGVP TGLVMLQPDF GTGVLIAASG VFVLLLAGLP
WWWVGLGVGG VAAVAPVAWF WLLRPYQKDR IMMFLDPEMD ALGAGWNIIQ SKIAIGSGGF
DGKGWGEGSQ SHLNFIPEQT TDFAFSVLSE EFGWIGVATV LALYLVVIGR CLWIASQSRD
SYSRLLAGAT GLAFFVYVLV NGGMISGLLP VVGVPMPLIS YGGTSAVSLL AGFGLVMAVR
SHNPVHGGYG