Gene Smal_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3442 
Symbol 
ID6476721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3872937 
End bp3873947 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID642732640 
Productlipoyl synthase 
Protein accessionYP_002029824 
Protein GI194367214 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.725492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.582796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAT CCACCGCCCG TTCCATTCCC CTGCAGATCG TGCAGGGCGA TTCTCCGTCC 
GCCGCGCCGT TGCAGGCCGG AGTCAAGCAG CTGGGCGGTG ACAAGATCAA CCGCTCGCCG
GTGCAGTTCG CCGACGCGCC GGTGCTGCGC AAGCCGTCGT GGATCCGCGT GCGCATTCCC
TCGGGCAATG CGGTGCAGAA CCTGAAGGCC AAGCTGCGCG AGAACCGCCT GGTGACGGTG
TGCGAGGAAG CCAGTTGCCC GAACATCCAC GAGTGCTTCG GCCACGGCAC GGCAACGTTC
ATGATCCTCG GCGAAGTCTG CACCCGTCGC TGCTCGTTCT GCGACGTCGC CCATGGCCGC
CCGAAGCCGC CGGATGCCAA CGAACCGGCC AGCCTCGGCC AGACCGTGGC CGACATGGGC
CTGAAGTACG TGGTGGTGAC CAGCGTCGAC CGCGATGACC TGCGCGACGG CGGTGCCCAG
CACTTCGTCG ACTGCATCAG CGCCATCCGC GAGAAGTCGC CGGGCACCCG CATCGAAGTG
CTGACCCCGG ATTTCCGTGG CAAGGGCCGC ATGGAGCGCG CGCTGGAGAT CCTGGCGCAG
AACCCGCCGG ATGTGTTCAA CCACAACATC GAGACCGTGC CGGACCTGTA CCGCAACGTA
CGCCCGGGCG CGGACTACCA GTGGTCGCTG AACCTGCTGA AGAACTTCAA GGCGCAGCAC
CCGGAGGTGC CGACCAAGAG CGGCATCATG CTGGGCCTGG GCGAAGAGTT CGAACAGATC
AAGGCCACCA TGCGCGACCT GCGCGCGCAC GACGTGGACA TGATCACCAT CGGCCAGTAC
CTGCAGCCGA CCGCGCACCA CCACCCGGTG CTGAAGTACT GGACCCCCGA GGACTACAAG
GCGCTGGAAG ACTACGGCTA CGAGCTGGGC TTCAGCCACG TGGCCTCCGG CCCGATGGTG
CGCTCGTCGT ACCACGCCGA CGTGCAGGCC AAGGGCGCCG GCGTCTCCTG A
 
Protein sequence
MTESTARSIP LQIVQGDSPS AAPLQAGVKQ LGGDKINRSP VQFADAPVLR KPSWIRVRIP 
SGNAVQNLKA KLRENRLVTV CEEASCPNIH ECFGHGTATF MILGEVCTRR CSFCDVAHGR
PKPPDANEPA SLGQTVADMG LKYVVVTSVD RDDLRDGGAQ HFVDCISAIR EKSPGTRIEV
LTPDFRGKGR MERALEILAQ NPPDVFNHNI ETVPDLYRNV RPGADYQWSL NLLKNFKAQH
PEVPTKSGIM LGLGEEFEQI KATMRDLRAH DVDMITIGQY LQPTAHHHPV LKYWTPEDYK
ALEDYGYELG FSHVASGPMV RSSYHADVQA KGAGVS