| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3432 |
|---|
| Symbol | |
|---|
| ID | 6476642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 3860723 |
|---|
| End bp | 3861472 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642732630 |
|---|
| Product | 20S proteasome A and B subunits |
|---|
| Protein accession | YP_002029814 |
|---|
| Protein GI | 194367204 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3484] Predicted proteasome-type protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.182468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0168143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATT GCGTTGGAAT CGAGGTGGAC GAGGGCCTGG TCTTCGCCGC CGACACCCGG
ACCAATGCCT CGCTGGACGA TGTGCGCGTG CACCGCAAGC TGCACGTGTT CGAGTACCCC
GGCCAGGCAG CCTACGTACT GATGGCGGCT GGCAACCTGG CCACCACCCA GCTGCTGGTG
TCGCGCCTGG TCCGCGACGC CGACGAGCGG CGTACGCCCA ACCTGCGTGA CATGGCCCAC
CTGTTCGAGG CCGCAGCCTA CGTTGGCCAG TTGCTGGTCG ACAGCCAGGT CAAGACCGAG
CACAGCGAGC ACGGCCATGA CGGGGTCAAC ACCCAGGCCA CGCTGATCTT CGGCGGCCAG
GTTGCCGGTG AACGCCCAGG GTTGTACATG GTCTACCCGT TGGGCAACGC CATCGCCGCC
TCGCCGGAGA CGCCCTACCT GCAGATCGGC GAATCCAAGT ACGGCAAGCC GATCCTCGAC
CGCATCCTCA GCCCGGCAAC ACGTCTGGAA GATGCCGCAC GCACGGCCAT CGTCTCGCTG
GACTCCACCA TCCGCTCCAA CCTGTCGGTG GGCCTGCCGA TCGACCTGGC GCTGCTGCGC
GATGGCGAAC TGCGCATCGG CCAGCAGCTG CGGCTGGGTG CGGATTCAGC GCTGTATGCC
GACATCCACC AGAACTGGTC GCGACGGCTG GAGCAGGCGG TGGACAGCCT GCCGCGGTTT
CCGTGGGAAA CCACGGATCG CCCGGTCTGA
|
|---|
| Protein sequence | MTYCVGIEVD EGLVFAADTR TNASLDDVRV HRKLHVFEYP GQAAYVLMAA GNLATTQLLV
SRLVRDADER RTPNLRDMAH LFEAAAYVGQ LLVDSQVKTE HSEHGHDGVN TQATLIFGGQ
VAGERPGLYM VYPLGNAIAA SPETPYLQIG ESKYGKPILD RILSPATRLE DAARTAIVSL
DSTIRSNLSV GLPIDLALLR DGELRIGQQL RLGADSALYA DIHQNWSRRL EQAVDSLPRF
PWETTDRPV
|
|---|
| |