Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3427 |
Symbol | |
ID | 6476637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3855157 |
End bp | 3857514 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642732625 |
Product | Beta-N-acetylhexosaminidase |
Protein accession | YP_002029809 |
Protein GI | 194367199 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0258977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAAGC CTTCCCGCGC CCGGATGCGC AGCGCAGTGC TGCTGGGCAG CCTGCTCGCT CTGCTGCCGG CACTGCCGGC ACTCGCCGCC GATCCCACGC CTGCCGCTGA AGCACCCGGC CCGCAGCTGC GCGCCGGCAG CCTGATGCTG ATTCCCGCCC CCAGCAATGT GCAGGCCGGC CAGGGCAGCG GCATCACCGT TCGCGCCGAT ACCGTGCTGC AGGCCGAAGG CGAAGTCGCG CAGCGCGTCG CCGCCCAGTT CGCCGACCTG CTGGCCCGCA GTGGTGGCCC GCGCCTGGTC CTGGCCAAGG GCAAGGCTGC AGCCAAGACC GGCAGCATCC GCTTCCAGAT CGTGCCCACC TTCCGCGACA GCGGCGAAAG CTACACGCTG GAGAGCACCG CGCAGGGCGT GGTGATCCAG GCCGGCAACG AGACAGGTCT TTTCTACGGC GCGACCACCC TGGCCCAGCT CGCCACCGGC GGCAGCAACG GCGTGCTGCC GGCAGTGCAG ATCCAGGACG CGCCGCGCTT CAGCTGGCGC GGCTTCATGC TCGACTCGGC GCGGCATTTC CAGAGCCTGG ACGAGATCAA GCGCGTGCTC GATGCAATGG CCGCGCACAA GCTCAATACC TTCCATTGGC ATCTCACCGA TGACCAGGGC TGGCGCATGG AGATCAAGCG CTACCCGAAG CTGACCGAAG TGGGCAGCTG CCGCCTGCCG GCCGGCGACG GTGGCATCGA TCCGGTCAGT GGCCAGGAAC ATCCGTACTG CGGCTTCTAC ACGCAGGAGC AGATCCGCGA GGTGATCGCC TACGCCGCCA AACTGCATAT CCAGGTGATT CCGGAAATCG ACGTGCCCGG CCATGCGACC GCTGCGATCG CCGCTTATCC CGAACTGGGC ACCATCGATA CACCACTGAA GCCGCTCAGC GAATGGGGCG TGTTCCCCAA CCTGTTCAAC GTCGAAGACA GCACGGTGAC CTTCCTCGAG AACGTGCTGG AAGAAGTGAT CGAACTGTTC CCCGCCAAGT ACGTGCACGT GGGTGGCGAC GAGGCGGTCA AGGACCAGTG GGAAGCTTCG AAGCAGGTGC AGCAGCGCAT GCATGCGCTG GGCATCAAGG ATGAAATGGC CATGCAGAGC CACATCATCA AGCGCCTGGA GACGTTCCTG GAGGAGCACG ACCGGCGCCT GATCGGCTGG GACGAGATCC TCGAAGGCGG GCTGCCGCCG CAGGCCACGG TGATGTCATG GCAGGGCACC GAAGGTGGCC TGGCTGCAGC CAGTGCCGGG CATGACGTGA TCATGTCGCC GGTCGGCTAC CTGTACCTGG ACTACCTGCA GACCGCCTCG CCGAACGAGC CGCCGGGTCG TCCGACCCAG GTCAACCTCG GCAAACTCTA CAACTTCGAA CCGGTGCCGG CCGAGCTGGC GGCCGACAAG CGCGGGCACA TCCTCGGCCT GCAGGCCAAC ATGTTCACCG AGCACACGCG CAGCTATGCG CGCCTGCAGC ACAACCTGTT CCCGCGCCTG GCCGCTGTGG CCGAGACCGG TTGGAGCACG CCGGAGCGTC GTGATTTCCG CGATTTCCTC GCACGCCTGC CGGCACAGCT GCAGCGCTAC CGTGCCTGGG GCCTGGCCTA CGCGCAGACC CCGTTCGAAG TGGGCGTGGA CTACACCGAC AGCCGCGCGG CCAACACGGT GACTCTGTCG CTGGCCAACC CGCTGGGCTA TGAAGTGCGC TACAGCACCG ACGGACAGCC AGTGACCGCG CAGTCGCCGC TGTACCAGCA GCCGCTGACC ACGCAGCTGC CCGCCAACGT GCAGGCCGCC GCGTTCTACC AGGGCCAGAT GCTGGCCGCG AGGCCGACGG TCGCGGACTT CAGCGCACAA TCGCTGCTCA GCCGCCGCAG CGATGAACTG CTCAGCTGCG TGGGCAAGAA GGGGTTGGTG CTGCGCCTGG AAGACGATGG CCCGCGCGAA GGCAACCGTG CGGTATTCAA CGTCGACATC TTCCAGCCGT GCTGGCGCTG GCCGCAGGCG CAGCTGGACG GCATCGGCAG CGTGGAAGTG CGTGCCGGCC GCATTCCGTA CTACTTCCAG CTGGCCCACG ACGAGCCCAA GCGCCGCTTC GAGAAGGCCA AGCGTGCGCA CGGCGAGATG CAGGTGCGTC GCGGAGACTG CAGCGGCAGG GTGCTGGCCG AAGTCCCATT GCCGGCCAAG CCGGATGCCG ATGGCTTCGT GACCCTGCGC GCCACGCTGC CGAAGGGGAC CCAGGGCAGC GCTGACCTGT GCATCAACTT CACCGGCGAT ACGCGCCCGG CGATGTGGGT GCTGGATGAG GTCACGCTGG GGAAGTAA
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Protein sequence | MVKPSRARMR SAVLLGSLLA LLPALPALAA DPTPAAEAPG PQLRAGSLML IPAPSNVQAG QGSGITVRAD TVLQAEGEVA QRVAAQFADL LARSGGPRLV LAKGKAAAKT GSIRFQIVPT FRDSGESYTL ESTAQGVVIQ AGNETGLFYG ATTLAQLATG GSNGVLPAVQ IQDAPRFSWR GFMLDSARHF QSLDEIKRVL DAMAAHKLNT FHWHLTDDQG WRMEIKRYPK LTEVGSCRLP AGDGGIDPVS GQEHPYCGFY TQEQIREVIA YAAKLHIQVI PEIDVPGHAT AAIAAYPELG TIDTPLKPLS EWGVFPNLFN VEDSTVTFLE NVLEEVIELF PAKYVHVGGD EAVKDQWEAS KQVQQRMHAL GIKDEMAMQS HIIKRLETFL EEHDRRLIGW DEILEGGLPP QATVMSWQGT EGGLAAASAG HDVIMSPVGY LYLDYLQTAS PNEPPGRPTQ VNLGKLYNFE PVPAELAADK RGHILGLQAN MFTEHTRSYA RLQHNLFPRL AAVAETGWST PERRDFRDFL ARLPAQLQRY RAWGLAYAQT PFEVGVDYTD SRAANTVTLS LANPLGYEVR YSTDGQPVTA QSPLYQQPLT TQLPANVQAA AFYQGQMLAA RPTVADFSAQ SLLSRRSDEL LSCVGKKGLV LRLEDDGPRE GNRAVFNVDI FQPCWRWPQA QLDGIGSVEV RAGRIPYYFQ LAHDEPKRRF EKAKRAHGEM QVRRGDCSGR VLAEVPLPAK PDADGFVTLR ATLPKGTQGS ADLCINFTGD TRPAMWVLDE VTLGK
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