Gene Smal_3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3427 
Symbol 
ID6476637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3855157 
End bp3857514 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content67% 
IMG OID642732625 
ProductBeta-N-acetylhexosaminidase 
Protein accessionYP_002029809 
Protein GI194367199 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3525] N-acetyl-beta-hexosaminidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0258977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGC CTTCCCGCGC CCGGATGCGC AGCGCAGTGC TGCTGGGCAG CCTGCTCGCT 
CTGCTGCCGG CACTGCCGGC ACTCGCCGCC GATCCCACGC CTGCCGCTGA AGCACCCGGC
CCGCAGCTGC GCGCCGGCAG CCTGATGCTG ATTCCCGCCC CCAGCAATGT GCAGGCCGGC
CAGGGCAGCG GCATCACCGT TCGCGCCGAT ACCGTGCTGC AGGCCGAAGG CGAAGTCGCG
CAGCGCGTCG CCGCCCAGTT CGCCGACCTG CTGGCCCGCA GTGGTGGCCC GCGCCTGGTC
CTGGCCAAGG GCAAGGCTGC AGCCAAGACC GGCAGCATCC GCTTCCAGAT CGTGCCCACC
TTCCGCGACA GCGGCGAAAG CTACACGCTG GAGAGCACCG CGCAGGGCGT GGTGATCCAG
GCCGGCAACG AGACAGGTCT TTTCTACGGC GCGACCACCC TGGCCCAGCT CGCCACCGGC
GGCAGCAACG GCGTGCTGCC GGCAGTGCAG ATCCAGGACG CGCCGCGCTT CAGCTGGCGC
GGCTTCATGC TCGACTCGGC GCGGCATTTC CAGAGCCTGG ACGAGATCAA GCGCGTGCTC
GATGCAATGG CCGCGCACAA GCTCAATACC TTCCATTGGC ATCTCACCGA TGACCAGGGC
TGGCGCATGG AGATCAAGCG CTACCCGAAG CTGACCGAAG TGGGCAGCTG CCGCCTGCCG
GCCGGCGACG GTGGCATCGA TCCGGTCAGT GGCCAGGAAC ATCCGTACTG CGGCTTCTAC
ACGCAGGAGC AGATCCGCGA GGTGATCGCC TACGCCGCCA AACTGCATAT CCAGGTGATT
CCGGAAATCG ACGTGCCCGG CCATGCGACC GCTGCGATCG CCGCTTATCC CGAACTGGGC
ACCATCGATA CACCACTGAA GCCGCTCAGC GAATGGGGCG TGTTCCCCAA CCTGTTCAAC
GTCGAAGACA GCACGGTGAC CTTCCTCGAG AACGTGCTGG AAGAAGTGAT CGAACTGTTC
CCCGCCAAGT ACGTGCACGT GGGTGGCGAC GAGGCGGTCA AGGACCAGTG GGAAGCTTCG
AAGCAGGTGC AGCAGCGCAT GCATGCGCTG GGCATCAAGG ATGAAATGGC CATGCAGAGC
CACATCATCA AGCGCCTGGA GACGTTCCTG GAGGAGCACG ACCGGCGCCT GATCGGCTGG
GACGAGATCC TCGAAGGCGG GCTGCCGCCG CAGGCCACGG TGATGTCATG GCAGGGCACC
GAAGGTGGCC TGGCTGCAGC CAGTGCCGGG CATGACGTGA TCATGTCGCC GGTCGGCTAC
CTGTACCTGG ACTACCTGCA GACCGCCTCG CCGAACGAGC CGCCGGGTCG TCCGACCCAG
GTCAACCTCG GCAAACTCTA CAACTTCGAA CCGGTGCCGG CCGAGCTGGC GGCCGACAAG
CGCGGGCACA TCCTCGGCCT GCAGGCCAAC ATGTTCACCG AGCACACGCG CAGCTATGCG
CGCCTGCAGC ACAACCTGTT CCCGCGCCTG GCCGCTGTGG CCGAGACCGG TTGGAGCACG
CCGGAGCGTC GTGATTTCCG CGATTTCCTC GCACGCCTGC CGGCACAGCT GCAGCGCTAC
CGTGCCTGGG GCCTGGCCTA CGCGCAGACC CCGTTCGAAG TGGGCGTGGA CTACACCGAC
AGCCGCGCGG CCAACACGGT GACTCTGTCG CTGGCCAACC CGCTGGGCTA TGAAGTGCGC
TACAGCACCG ACGGACAGCC AGTGACCGCG CAGTCGCCGC TGTACCAGCA GCCGCTGACC
ACGCAGCTGC CCGCCAACGT GCAGGCCGCC GCGTTCTACC AGGGCCAGAT GCTGGCCGCG
AGGCCGACGG TCGCGGACTT CAGCGCACAA TCGCTGCTCA GCCGCCGCAG CGATGAACTG
CTCAGCTGCG TGGGCAAGAA GGGGTTGGTG CTGCGCCTGG AAGACGATGG CCCGCGCGAA
GGCAACCGTG CGGTATTCAA CGTCGACATC TTCCAGCCGT GCTGGCGCTG GCCGCAGGCG
CAGCTGGACG GCATCGGCAG CGTGGAAGTG CGTGCCGGCC GCATTCCGTA CTACTTCCAG
CTGGCCCACG ACGAGCCCAA GCGCCGCTTC GAGAAGGCCA AGCGTGCGCA CGGCGAGATG
CAGGTGCGTC GCGGAGACTG CAGCGGCAGG GTGCTGGCCG AAGTCCCATT GCCGGCCAAG
CCGGATGCCG ATGGCTTCGT GACCCTGCGC GCCACGCTGC CGAAGGGGAC CCAGGGCAGC
GCTGACCTGT GCATCAACTT CACCGGCGAT ACGCGCCCGG CGATGTGGGT GCTGGATGAG
GTCACGCTGG GGAAGTAA
 
Protein sequence
MVKPSRARMR SAVLLGSLLA LLPALPALAA DPTPAAEAPG PQLRAGSLML IPAPSNVQAG 
QGSGITVRAD TVLQAEGEVA QRVAAQFADL LARSGGPRLV LAKGKAAAKT GSIRFQIVPT
FRDSGESYTL ESTAQGVVIQ AGNETGLFYG ATTLAQLATG GSNGVLPAVQ IQDAPRFSWR
GFMLDSARHF QSLDEIKRVL DAMAAHKLNT FHWHLTDDQG WRMEIKRYPK LTEVGSCRLP
AGDGGIDPVS GQEHPYCGFY TQEQIREVIA YAAKLHIQVI PEIDVPGHAT AAIAAYPELG
TIDTPLKPLS EWGVFPNLFN VEDSTVTFLE NVLEEVIELF PAKYVHVGGD EAVKDQWEAS
KQVQQRMHAL GIKDEMAMQS HIIKRLETFL EEHDRRLIGW DEILEGGLPP QATVMSWQGT
EGGLAAASAG HDVIMSPVGY LYLDYLQTAS PNEPPGRPTQ VNLGKLYNFE PVPAELAADK
RGHILGLQAN MFTEHTRSYA RLQHNLFPRL AAVAETGWST PERRDFRDFL ARLPAQLQRY
RAWGLAYAQT PFEVGVDYTD SRAANTVTLS LANPLGYEVR YSTDGQPVTA QSPLYQQPLT
TQLPANVQAA AFYQGQMLAA RPTVADFSAQ SLLSRRSDEL LSCVGKKGLV LRLEDDGPRE
GNRAVFNVDI FQPCWRWPQA QLDGIGSVEV RAGRIPYYFQ LAHDEPKRRF EKAKRAHGEM
QVRRGDCSGR VLAEVPLPAK PDADGFVTLR ATLPKGTQGS ADLCINFTGD TRPAMWVLDE
VTLGK