Gene Smal_3423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3423 
Symbol 
ID6476633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3848401 
End bp3849501 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content68% 
IMG OID642732621 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002029805 
Protein GI194367195 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0558625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACG GCAGCCAACC CCAGGGGAAA CCGATGCGCA GAGCGACCAT CAAGGACGTT 
GCGGAGAAGG CCAAGGTCTC GTTGAAGACG GTCTCGCGGG TGATCAACAA CGAACCTTCG
GTGATGCAGG CCACCCGCGC GCGGGTCCTG CGTGCCATCG CCGAGCTGGA CTACGAGCCC
GATCCGTCGG CGCGCAACCT GCGCAGTGGC ACCACCTTCG TGATCGGGCT GGTCTACGAC
AACCCGAACC CGTACCACAT CATCGGCGTG CAGAACGGCG TGCTGGCCGC GTGCCGCGAG
ACCGGTTTCG GCCTGCAGAT CCATCCCTGC GATTCCAGCT CGCCGCTGCT GGCCGACGAG
CTGGCCGATT GGGTGCAGCG TTCGCGCCTG GCCGGTCTGG TACTGACCGC GCCGATGTCC
GAGCGTCGTG ACCTGATCCA GGCGCTGACC GCGCGCGGCA TCAAACTGGT GCGGATCATC
GCGGCCACCG AAGACCCGGC CGACGGCGCC TGCGTGTTCG TGGACGACCG CGAGGCCGCC
TATGAGATCA CCGAGCACCT GATCCAGCTG GGCCACCAGC GCATCGGCTT CCTCTGGGGC
GGCATCTCGC ACCGTTCCTC GGGTGAGCGC TACGCCGGTT ACGAAGCTGC GCTGAAGGAC
TACGGCATGA CCGTGGACAA GCACCTGGTG GTGCAGGGCG ACTACACCTT CGACGATGGT
TTCCGTGGTG CGCGCCGCCT GCTGGCGCTG CGCGAGCCGC CCACCGCCAT CTTCGGTTCC
AACGACGAAA TCGCCGCCGG CGTACTGGCC GCTGCCAAGT CGGCCGGCAT GAACGTGCCC
TACGACCTGT CCATTGCCGG TTTCGAGGAC AGCCCGTTCT CGCGCCAGTC GTGGCCGCCG
CTGACCACCG CCAAGCAGGC CACCGAGGAC ATTGCCCGCC ATGCCGCGCG CTTGCTGATC
GCACAGCTGC GCAGCGACGC CTACGACGAT GCGCCGGCAC CGCTGCACAA CCAGGGCTTC
GTGCCACAAC TGGTGGTGCG CGGCTCGACC GCGCCGATGC GCCCGGCCGG CGCACGCCCC
CTTCCTTCCG ATCCTGCCTG A
 
Protein sequence
MMDGSQPQGK PMRRATIKDV AEKAKVSLKT VSRVINNEPS VMQATRARVL RAIAELDYEP 
DPSARNLRSG TTFVIGLVYD NPNPYHIIGV QNGVLAACRE TGFGLQIHPC DSSSPLLADE
LADWVQRSRL AGLVLTAPMS ERRDLIQALT ARGIKLVRII AATEDPADGA CVFVDDREAA
YEITEHLIQL GHQRIGFLWG GISHRSSGER YAGYEAALKD YGMTVDKHLV VQGDYTFDDG
FRGARRLLAL REPPTAIFGS NDEIAAGVLA AAKSAGMNVP YDLSIAGFED SPFSRQSWPP
LTTAKQATED IARHAARLLI AQLRSDAYDD APAPLHNQGF VPQLVVRGST APMRPAGARP
LPSDPA