Gene Smal_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3406 
Symbol 
ID6476616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3826411 
End bp3827148 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID642732604 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_002029788 
Protein GI194367178 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.325788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.617389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGACGG CCAACATCCA GGCCGGCTCA AGTACCCGCC GCTACAGTGA CTATGTGACC 
CGCAGCTGGT CACATGCACT GCCGGCGGGT CGCAAGCGCA GCAGTCTTGA CGCGATCGCC
ACTTTGGCGC GCGAACACGA CATCGTCGGC CTGCAGGAGG CCGACCCGGG CAGCCTGCGC
TCGGGCTTCA CCAACCAGAC CCACTACCTG GCCCAGCGCG CCGGCTTCAA CTACTGGAGC
CACCAGCCGA ACCGGCGCAT GGGCGGGGTC GCTTCCAGCG CCAATGGCCT GCTGAGCAAA
CTGGAACCGG TGGAAGTACA GGACCACGCC CTGCCCGGCC GCATTGGCGG GCGCGGCGTA
CTGCTGGCCA AGTTCGGGGA TGGCGAGGAC GGCCTGGCGG TGGCGGTGGC CCATCTGTCG
CTGGGGGCGG GTTCGCGGAT GTCGCAGCTG GGCTTCATCG CCGAGCTGCT GTCCGACCAC
CCCAACGCGG TACTGATGGG CGACTTCAAC TGCCTGGCCG AACGCCCGGA AATGCAGGTG
CTGTACCAGA AGACCCGGCT GCAGCCACCC GGCTGCATCG TGCCGACCTT CCCCAGCTGG
CGCCCCGACC GCGCCATCGA CCACATCCTG GTCAGCAGCG GCCTGCAGAC CCGCACAGTG
GAAGCCGTAC CGGCGGCGTT CTCCGATCAC CTCGCGCTGG CGATGGCGAT CGACGTACCG
GCCAACGCCC TGCGCTGA
 
Protein sequence
MLTANIQAGS STRRYSDYVT RSWSHALPAG RKRSSLDAIA TLAREHDIVG LQEADPGSLR 
SGFTNQTHYL AQRAGFNYWS HQPNRRMGGV ASSANGLLSK LEPVEVQDHA LPGRIGGRGV
LLAKFGDGED GLAVAVAHLS LGAGSRMSQL GFIAELLSDH PNAVLMGDFN CLAERPEMQV
LYQKTRLQPP GCIVPTFPSW RPDRAIDHIL VSSGLQTRTV EAVPAAFSDH LALAMAIDVP
ANALR