Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3402 |
Symbol | engB |
ID | 6476612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3823108 |
End bp | 3823716 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642732600 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_002029784 |
Protein GI | 194367174 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.226521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.48515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATGT CATTGCTCAT CGAACGCGCC CAATACCACC TCTCTGCCCA CAACATGGGG CAGCTGCCGC CCGATGAGGG GGCCGAAGTG GCCTTTGCGG GCCGCTCCAA CGCCGGCAAG TCCAGTGCCC TCAACGCATT GACCCGCCAG AACAGCCTGG CCCGTGTCTC CAAGACCCCC GGCCGCACCC AGCAGCTGGT GTTCTTCCAG GTGACCCCGG AAGCCCATCT GGTCGATCTG CCTGGTTACG GCTACGCCAA GGTGCCGCTG GACCTGCAGG CGCACTGGCA GGCCTTCATC GACCGCTACT TCCGCACCCG CAATGCGCTG AGGGGCCTGG TGGTGGTGAT GGATATCCGC CACCCGCTGA AGGACTACGA CCGGCAGATG CTGGCCTATG CCGTGCAGCG TGGCCTGCCG GCGCATGCGT TGCTGACCAA GGCCGACAAG CTGAGCCGCA GCCAGCAGAT GCAGACCCTG CAGAAGGTGC GCAAGGAACT GCACTCCTCC TTCGGTGATA CGGTCAGCGT GCAGGTGTTC TCCGGCGCCG CCCGCACCGG TGTGGACGAA GCCCGCGGCA TCATCGGCGG CTGGTTGGGG CTGGAATAA
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Protein sequence | MHMSLLIERA QYHLSAHNMG QLPPDEGAEV AFAGRSNAGK SSALNALTRQ NSLARVSKTP GRTQQLVFFQ VTPEAHLVDL PGYGYAKVPL DLQAHWQAFI DRYFRTRNAL RGLVVVMDIR HPLKDYDRQM LAYAVQRGLP AHALLTKADK LSRSQQMQTL QKVRKELHSS FGDTVSVQVF SGAARTGVDE ARGIIGGWLG LE
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