Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3399 |
Symbol | |
ID | 6476609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3819875 |
End bp | 3820579 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642732597 |
Product | protein of unknown function DUF125 transmembrane |
Protein accession | YP_002029781 |
Protein GI | 194367171 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.233589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCC ATTCACGACA CCCTGAGCTG CACCGCGCCG ACCGTGTCGG CTGGCTGCGT GCCGCCGTGC TGGGGGCAAA CGACGGCATC GTATCAGTGG CCGGCCTGGT CGTCGGCGTG GCCGCCAGCG GCGCTTCGGC CAGCACGATC CTCGCCACCG GCATAGCCGG CACCGTAGCG GGTGCGATGT CGATGGCTGC CGGTGAGTAT GTCTCCGTGC AGACCCAGGC CGACACCGAA AACGCCGACC TGGCCATGGA GAAGCGTGAA CTGCACGAAG ACCCGCACAG CGAGCTGGAA GAGCTGGCGG CGATCTACCG CCACCGCGGA CTGGAGCCGG CGCTTGCGCG GCAGGTCGCC GAGCAGCTCA CCGCCCACGA TGCACTGGGC GCTCACGCCC GCGACGAGCT GGGCATCACC GAAGAACTGC GCGCACGCCC GCTGCAGGCG GCGATGGCCT CGGCCAGCGC CTTCACCTGC GGCGCCGCGC TGCCGGTGCT GACCGCGCTG CTGGCACCGG CCAACAAGGT GGCGATGATG ACCACGGCCA GCACCCTGCT CGGCCTGTGC CTGACCGGCG CAATGGCCGC CCGGGCCGGC GGTGCTTCGC CTGCACGCGG TGCGATCCGG GTAATGTTCT GGGGCGCGCT GGCAATGGCC GCCGCTGCCG GTGTCGGCAG ACTGCTGGGA GCCCACGTGT CATGA
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Protein sequence | MSRHSRHPEL HRADRVGWLR AAVLGANDGI VSVAGLVVGV AASGASASTI LATGIAGTVA GAMSMAAGEY VSVQTQADTE NADLAMEKRE LHEDPHSELE ELAAIYRHRG LEPALARQVA EQLTAHDALG AHARDELGIT EELRARPLQA AMASASAFTC GAALPVLTAL LAPANKVAMM TTASTLLGLC LTGAMAARAG GASPARGAIR VMFWGALAMA AAAGVGRLLG AHVS
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