| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3398 |
|---|
| Symbol | |
|---|
| ID | 6476608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3818358 |
|---|
| End bp | 3819722 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642732596 |
|---|
| Product | glutamate/cysteine ligase |
|---|
| Protein accession | YP_002029780 |
|---|
| Protein GI | 194367170 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3572] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01436] glutamate--cysteine ligase, plant type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.135789 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGAGCC CCAGCCACGT CGCCGATACG CCCATTACCG ACCGCTCGCA GCTGGTGGCG
GAGATCGCCT CCGGCGAGAA GCCCCGCGCG CAGTGGCGCA TCGGTACCGA GCACGAGAAG
TTCGGGTTCC GCCTGGATGA CCTGCGTCCA CCGACCTTCG AAGGCGAGCG CGGGATCGAA
GCGCTGCTCA ATGGCCTGGT GCGGTTCGGC TGGGCACCCG TGCAGGAGAA CGGCAATACC
ATCGCCCTGC TGCGCGATGG CGCCTCGGTG ACGCTGGAAC CGGCCGGCCA GCTGGAACTG
TCCGGCGCGG CGCTGGAGAC CATCCACCAG ACCTGCGTGG AAACCGGCAC CCACCTCAAC
GAGGTGGCGC AGGTGGCCGG TGAACTGCAG CTGGGCTTCC TCGGCATGGG CTTCCAGCCG
AAGTGGAAGC GCGACGAGAT GCCGTGGATG CCGAAGGGCC GCTACAAGAT CATGCGTGCG
TACATGCCCA AGGTCGGCTC GCTGGGCCTG GACATGATGA CCCGCACCTG CACGGTGCAG
GTGAACCTGG ATTACGCCAC CGAAGCGGAC ATGGTGAAGA AGTTCCGCGT GTCGCTGGCG
CTGCAGCCGA TCGCCACCGC GCTGTTCGCC GATTCGCCGT TCACCGAAGG CAAGCCGAAC
GGCTACCTGA GCTACCGCTC GCATATCTGG ACCGACACCG ACGCCGACCG CACCGGCATG
CTCGACTTCG TGTTCGAGGA TGGCTTTGGT TACGAACGCT ATGTCGACTA CCTGCTCGAC
GTGCCGATGT ATTTCTCCTA CCGCGATGGC GTCTACCACG ATGCCAGCGG GCAGAGCTTC
CGCGACTTCA TGCAGGGCAA GCTGCCGATT CTGCCGGGTG CGCTGCCGAC CATGCGCGAC
TGGTCGGACC ATATGACCAC CGCGTTCCCG GAAGTGCGCC TGAAGAAGTA CCTGGAAATG
CGCGGCGCCG ATGGTGGCCC GTGGAGCCGC CTGTGCGCGC TGCCGGCGTT CTGGGTCGGC
CTGCTGTACG ACGACACCGC TCTGGATGCC GCCTGGGACC TGGTGCGTGA CTTCACCCTG
GCCGAGCGTC ATGCGCTGCG TGACGGCGTG CCGAAGCATG CGATGAACCT GCCGTTCCGC
AATGGCAGCG TGCGTGACCT GGCCCGCGAG GCGGTGAAGA TTTCCGTGGA AGGCCTCAAG
CGCCGCGCCG CACGCAATGC CGACGGCCAG GACGAGAGCA AGTTCCTGGA CGTGTTGCAG
GAAATCGTCG AGTCCGGCCT GACCCCGGCC GAACGCAAGC TGGCGCTGTT CCATGGCCGC
TGGCACGGCG ACGTCGACCC GGTGTTCCGC GAGTTCGCGT ATTGA
|
|---|
| Protein sequence | MSSPSHVADT PITDRSQLVA EIASGEKPRA QWRIGTEHEK FGFRLDDLRP PTFEGERGIE
ALLNGLVRFG WAPVQENGNT IALLRDGASV TLEPAGQLEL SGAALETIHQ TCVETGTHLN
EVAQVAGELQ LGFLGMGFQP KWKRDEMPWM PKGRYKIMRA YMPKVGSLGL DMMTRTCTVQ
VNLDYATEAD MVKKFRVSLA LQPIATALFA DSPFTEGKPN GYLSYRSHIW TDTDADRTGM
LDFVFEDGFG YERYVDYLLD VPMYFSYRDG VYHDASGQSF RDFMQGKLPI LPGALPTMRD
WSDHMTTAFP EVRLKKYLEM RGADGGPWSR LCALPAFWVG LLYDDTALDA AWDLVRDFTL
AERHALRDGV PKHAMNLPFR NGSVRDLARE AVKISVEGLK RRAARNADGQ DESKFLDVLQ
EIVESGLTPA ERKLALFHGR WHGDVDPVFR EFAY
|
|---|
| |