| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3390 |
|---|
| Symbol | |
|---|
| ID | 6476600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3810718 |
|---|
| End bp | 3811623 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642732588 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002029772 |
|---|
| Protein GI | 194367162 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.318019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.290543 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCGC TGGAATCCTT GAATGGCCTG GTGACGTTCG TCACGACCGC ACGCTCGGGC
AGCTTCACCG AGGCGGCAGA CGCGCTGGGC ATCTCGCGCT CGGCGGTGGG CAAGGCCATC
GCCCGTCTGG AAGCGCGGCT GGGGGTGCGC CTGTTCCATC GCACTACGCG GCGCATCGCA
CTGACTACTG ATGGCGAGGC GTACTACGCC TCCTGTGCGG CGGCGCTGGA AGAAATCTCC
GCGGCCGAGG CCTGTCTGGG TTCGGCGGGC CTGCCCAGCG GGCGGCTGCG CATCGACATG
CCGTCCTCGT TCGGGCGGCT GGTGGTGCTG CCGGTGCTGC TGCGGTTGTG CCGCCAGTAT
CCGGACCTGC AGTTGACGAT GACCTTCACC GATCACTTCG TCGATCCGGT CGAAGAGGGC
ATCGACCTGC TGATCCGCTT CGGTGGGCTG CACCATGCCG AGCATCTGGT CGCGCGCCGG
CTGGGGCGCC AGCGGCTGGT TACCTGCACA TCGCCGGCGT ACCTGCAGGC ACATGGCGTG
CCGCGCACGG TGGAGGAACT GGCGCAGCAC CGCAGCATCG TCGGCTTCCG CCATGGCCAG
CCGGTCTGGT GGCGGATCGG CAGCGAGGAG GACGAGGGAA CGTTCATTCC CAGTGCGCCG
TATCAACTCA ATGACGGCGA CGCGGTGATC GAAGCGGCCA TCGCCGGGCT CGGTATCTGC
CAGATGCCGG TTTCACTGGT GCGTCGCCAC CTGGAATCCG GCGCACTGCA ATCGGTGCTG
GACGAGCACA TGCAGCGGCA CATCGACATC CATGCGCTGT GGCCACCGAC GCGCCACCTG
CGGCCCAAGG TGCGCTATGT GGTGGATGAG CTGACCCGGC TGGCGGGTGA GGGCGTGTTT
GACTGA
|
|---|
| Protein sequence | MLPLESLNGL VTFVTTARSG SFTEAADALG ISRSAVGKAI ARLEARLGVR LFHRTTRRIA
LTTDGEAYYA SCAAALEEIS AAEACLGSAG LPSGRLRIDM PSSFGRLVVL PVLLRLCRQY
PDLQLTMTFT DHFVDPVEEG IDLLIRFGGL HHAEHLVARR LGRQRLVTCT SPAYLQAHGV
PRTVEELAQH RSIVGFRHGQ PVWWRIGSEE DEGTFIPSAP YQLNDGDAVI EAAIAGLGIC
QMPVSLVRRH LESGALQSVL DEHMQRHIDI HALWPPTRHL RPKVRYVVDE LTRLAGEGVF
D
|
|---|
| |