Gene Smal_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3387 
Symbol 
ID6476597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3808660 
End bp3809769 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID642732585 
ProductS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 
Protein accessionYP_002029769 
Protein GI194367159 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0945129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.744246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCCC GTGCCGCCGT CGCCTTTGGT CCCGGCCAGC CGCTGCAGAT CGTTGAGATC 
GACGTCGCCC CGCCGAAGAA GGGCGAAGTG CTGGTCAAGA TCACCCACAC CGGTGTCTGC
CACACCGATG CATTCACCCT GTCCGGCGAT GATCCGGAAG GCCTGTTCCC GGTGGTGCTG
GGCCATGAAG GCGCCGGCAT CGTGGTGGAA GTGGGCGAGG GCGTGACCAG CGTCAAGCCG
GGCGACCACG TCATTCCGCT GTACACCGCC GAGTGCGGCG AGTGCCTGTT CTGCAAGAGT
GGCAAGACCA ACCTGTGCGT GTCGGTACGT GCCACCCAGG GCAAGGGCGT GATGCCCGAC
GGCACCAGCC GCTTCAGCTA CAACGGCGAG CCGCTGTACC ACTACATGGG TTGCTCGACC
TTCAGCGAGT ACACCGTGGT GGCCGAAGTC TCGCTGGCGA AGATCAATCC GGACGCGAAC
CCGGAGCACG TCTGCCTGCT CGGTTGTGGC GTCACCACCG GCATCGGCGC GGTGCACAAC
ACCGCCAAGG TGCAGGAAGG CGACAGCGTG GCGGTGTTCG GCCTGGGTGG CATCGGCCTG
GCGGTGATCC AGGGTGCGCG CCAGGCCAAG GCCGGCCGCA TCATCGCGGT GGACACCAAC
CCGTCCAAGT TCGAACTGGC GCGCGAATTC GGCGCCACCG ACTGCATCAA CCCGAAGGAC
TACGACAAGC CGATCCAGCA GGTCATCGTC GAGATGACCA CCTGGGGCGT GGACCACAGC
TTCGAGTGCA TCGGCAACGT CAACGTGATG CGCGCGGCGC TGGAATGCGC GCACCGGGGC
TGGGGCCAGA GCGTGGTGAT CGGCGTGGCC GGTTCGGGCC AGGAGATCTC CACCCGTCCG
TTCCAGCTGG TGACCGGGCG CAAGTGGATG GGTACTGCCT TCGGCGGCGT GAAGGGCCGC
AGCCAGTTGC CGGGCATGGT GGAGGACGCG ATGAAGGGCG ATATTGAGCT GGCACCGTTC
GTCACCCACA CCATGGACCT GGACAAGATC AACGAAGCCT TCGACCTGAT GCACGAAGGC
AAGTCGATCC GTTCAGTGGT CCACTACTGA
 
Protein sequence
MKSRAAVAFG PGQPLQIVEI DVAPPKKGEV LVKITHTGVC HTDAFTLSGD DPEGLFPVVL 
GHEGAGIVVE VGEGVTSVKP GDHVIPLYTA ECGECLFCKS GKTNLCVSVR ATQGKGVMPD
GTSRFSYNGE PLYHYMGCST FSEYTVVAEV SLAKINPDAN PEHVCLLGCG VTTGIGAVHN
TAKVQEGDSV AVFGLGGIGL AVIQGARQAK AGRIIAVDTN PSKFELAREF GATDCINPKD
YDKPIQQVIV EMTTWGVDHS FECIGNVNVM RAALECAHRG WGQSVVIGVA GSGQEISTRP
FQLVTGRKWM GTAFGGVKGR SQLPGMVEDA MKGDIELAPF VTHTMDLDKI NEAFDLMHEG
KSIRSVVHY