| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3379 |
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| Symbol | |
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| ID | 6476589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3800942 |
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| End bp | 3802024 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642732577 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002029761 |
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| Protein GI | 194367151 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.316914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCA ATCGAACCAC TCTCAATACC GGCCTGGGCC TGGGCGTGCT GGCCCTGGCC
ATCGGTGCCT GGCTGCTGCT GCGCGACGGC GGTCACCAGA CCACCAACAA TGCCTATGTC
GTTGCCGACT ACACGCTGGT CGCGCCGAAG ATTCCCGGCT TCGTCAGTGC CGTGGAAGTA
GAGGACAACC AGTCGGTGAA GGCGGGCGAC GTGCTTGCCC GCATCGACGA CCGCGACTAC
CAGGTGGCCC TGCAGGCGGC CCGTGCCGAC CTCGCCAACG CCCGTGCACA GCTGGCCAAC
GCGCAGGCCG CACTGGCCCA GCAGGACTCG CTGATTGAAC AGGCCAGGGC CAGTGTCGAT
GTCAGCCGCT CCGAACTGAC CCTGGCCAGC GCCGACCAGC AGCGTTACCG CGAACTGGCC
CGTGATGGCG CCGGCACCGT GCAGAACGCG CAGCAGGCGC AGTCGAAGCA GGCCGTGGCC
AGTGCGCATC TGCAGCAGGG CCAGGCCGCG CTGTCGACCG CACGCCAGCG CACCGACATC
CTCAGCGCTG GCGTGCAGGC CGCGCAGGCG GCGGTACAGC GTGCAGAAGC GGCGCAGGCG
CGTGCCGAAC TGGACCTGTC GCACACCGTG CTGCGCGCGC CGATCGACGG CATGGTCGGC
CGTCGTGCGG TACGCGTGGG CGCCTACCTG ACCCCGGGTA CGCCGGTGGC TGCGGTGGTA
CCGCTGAAGC GCGCCTTCGT GGTCGCCAAC TTCCAGGAAA CGCAGATGAC CCGCATGCAG
GCCGGCCAAC AGGTCGAGCT GAAGGTGGAC GTGTTCCCGG GCAAGCCGCT GCGCGGGCAC
ATCGACAGCA TCGCACCGGC CACCGGCGTC ACCTTCGCCG CCGTCGCACC GGAAAACGCC
ACCGGCAACT TCACCAAGGT GGTGCAGCGC ATTCCGGTCA AGATCGTGCT GGAACCCGGC
CAGCCACTGC TGGACCAGCT GCGTGCCGGC ATGTCGGTGG AAGCCAGTGT TGACCTGGGC
AGCCGCGCCC GCGCGCAGAG CGTGCAGCAC AGTCCGGGCC ACAAGAGCGG GGAGGGTGCA
TGA
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| Protein sequence | MTINRTTLNT GLGLGVLALA IGAWLLLRDG GHQTTNNAYV VADYTLVAPK IPGFVSAVEV
EDNQSVKAGD VLARIDDRDY QVALQAARAD LANARAQLAN AQAALAQQDS LIEQARASVD
VSRSELTLAS ADQQRYRELA RDGAGTVQNA QQAQSKQAVA SAHLQQGQAA LSTARQRTDI
LSAGVQAAQA AVQRAEAAQA RAELDLSHTV LRAPIDGMVG RRAVRVGAYL TPGTPVAAVV
PLKRAFVVAN FQETQMTRMQ AGQQVELKVD VFPGKPLRGH IDSIAPATGV TFAAVAPENA
TGNFTKVVQR IPVKIVLEPG QPLLDQLRAG MSVEASVDLG SRARAQSVQH SPGHKSGEGA
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