Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3378 |
Symbol | |
ID | 6476588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3799533 |
End bp | 3800945 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642732576 |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_002029760 |
Protein GI | 194367150 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.469197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAG TCACCCTGTT CCGCACCTTC GTTGCGGCCA GCCTGTGCAC GGCCCTGGCT GCCTGCACGA TGGGTCCGGA CTTCGTACGC CCGCAGGCGG AACTGCCCAG CCACTGGCAG GGTGAGGCGG TCGCCGGCAA CGCCATCGAC CAGGACGCGG CCTGGTGGGC CGGCTTCGAC GATCCACTGC TGGCGCAGCT TGCCGGCCAG GTGCTCGCGG CCAACCTGGA CCTGCAGCTG GCCGCCAACC GCGTGCAGCA GAGCCGCGCC GCACGTGGCA TCACCGCCGC CGATCGCCTG CCCAGCGTCA GCGCGAGCGC CAGTGGCGTG CGTTCACGCA ACAGCGAGGT GGGCCTGAAT GATCCGTCCG GCAACGGCGG CCGTGATGAC TACGGGCTGT TCCAGGCCGG CATCGGCCTG AGCTGGGAAC TGGACCTGTG GGGGCGTGTG CGCCGCCAGG TGGAAGCGGC CGACGCACGC GTGCAGATGG CCGAGGAGGA TGCACACGCT GTGCGCATCG CGCTGCTGGC GGAAACCGCG CGTGATTACT TGCAGCTGCG CGCGACGCGG CAGCTGCTGG CGATCACCGA GGACAACCTC AGCATCGCCC TCGACATGAA GCGCCTGACC GAGGCACGCC AGCAACAGGG CGTGGCCAGC ACGCTGCAGG TGTCCAGCGC GTCCGCGCAG GTGGCATCGC TGCAGGCCCG CATCGCGCCG CTGCGGCATC GTGAATCGCA GCTGCGCAAT GCGCTGGCGT TCCTGCTGGC GCAGCCGCCG CAGGCGCTGG ACGCGCAGCT GCAGGATGCA CGCCGCGACT GGCCGGCGCT GCCGGCCGTA GCGGTGGGGG TGCCCAGCGA ACTGGCCGAG CGTCGCCCGG ACATCCGTCG TGCCGAAGCG GCACTGCATG CGGCAACCGC CGGCATCGGC GTGGCCAAGG CCAGTTTCCT GCCGCGCATC ACCTTGAATG GCGACGCTGG GTTCCAGGCC AAGCAGCTGG ATGATTTGGA TGGCTGGAAC GCGCACCGCT TCAGCATCGG CCCGTCGATC AGCGTACCGA TCTTCCAGGG CGGGCGGCTG AAGGCCAACC TCGCGCTGAG CAGGCTGCAG CAGCAACAGT CGGCGCTGCA GTTCCGCCGT ACCGTGCTGC AGGCCTGGCA TGAAGTGGAC GACGCCATCG ATGGCTATGC CGCCGAGCAG CAGCGCACGG TGCAGCTGCA TGTGGCGGTG GACGAGAGCG AGAGCGCACT GGGCGCGGCG CGCCGGCAGT ACCAGGCTGG CGTGGTCGAC ATGCTGGATG TGCTGACCAC CCAGCGCATC GCGCTGGACA ACCAGGCTGC ACTGGCCAAC AGCCAGGCCA CGGCTGCGAT CGCGCGGGTG GAGCTGTACC GCGCGCTGGG CGGTGGCTGG TAG
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Protein sequence | MSAVTLFRTF VAASLCTALA ACTMGPDFVR PQAELPSHWQ GEAVAGNAID QDAAWWAGFD DPLLAQLAGQ VLAANLDLQL AANRVQQSRA ARGITAADRL PSVSASASGV RSRNSEVGLN DPSGNGGRDD YGLFQAGIGL SWELDLWGRV RRQVEAADAR VQMAEEDAHA VRIALLAETA RDYLQLRATR QLLAITEDNL SIALDMKRLT EARQQQGVAS TLQVSSASAQ VASLQARIAP LRHRESQLRN ALAFLLAQPP QALDAQLQDA RRDWPALPAV AVGVPSELAE RRPDIRRAEA ALHAATAGIG VAKASFLPRI TLNGDAGFQA KQLDDLDGWN AHRFSIGPSI SVPIFQGGRL KANLALSRLQ QQQSALQFRR TVLQAWHEVD DAIDGYAAEQ QRTVQLHVAV DESESALGAA RRQYQAGVVD MLDVLTTQRI ALDNQAALAN SQATAAIARV ELYRALGGGW
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