Gene Smal_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3337 
Symbol 
ID6476465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3745619 
End bp3746392 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content64% 
IMG OID642732535 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002029719 
Protein GI194367109 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC ATTCCCTCAA GGGCAAGACC GTGCTGATCG CTGGCGGTGC CAAGAACCTG 
GGCGGGCTGC TGGCCCGCGA CTTTGCCAGC CAGGGCGCCA AGGCCATCGT CATCCACTAC
AACAGTGCCG CCACCCAGGC TGATGCGGAA GCAACGGTCG CCGCCGTGCA GGCCGCTGGC
AGCAAGGCGG TGGCGCTGCA GGGCGACCTG ACTTCGGCCG CAGCGATGGA GCGCTTGTTC
GCCGATGCCG TGGCTGCAGT CGGCCGGCCG GACATCGCCA TCAATACCGT CGGCAAAGTG
CTGAAGAAGC CGATGCTGGA GATCAGCGAA GCCGAGTACG ACGAGATGAG CGCGGTCAAT
GCGAAGTCCG CGTTCTTCTT CCTCAAGGAA GCCGGTCGAA ACGTCAATGA CGGCGGTCGC
ATCTGCACCC TGGTCACCTC GTTGCTGGGC GCGTTCACGC CGTTCTATTC CAGTTATGCC
GGCACCAAGG CGCCAGTGGA GCATTTCACC CGTGCGGCGT CGAAGGAATT CGGTGAGCGC
GGTATCTCGG TGACGGCGAT CGGCCCCGGT CCGATGGACA CGCCGTTCTT TTATCCGGCC
GAGAGTGCCG ACGCGCAGGC GTACCACAAG ACCGCGGCGG CGCTGTCGGC ATTCACCCGC
ACCGGCCTGA CCGACATCGC CGACATCGTG CCGTGGATCC GCTTCCTGGT CACCGACGGC
TGGTGGATGA CTGGCCAGAC CATCCTGGTC AATGGCGGGT ACACCACAAA GTAA
 
Protein sequence
MTDHSLKGKT VLIAGGAKNL GGLLARDFAS QGAKAIVIHY NSAATQADAE ATVAAVQAAG 
SKAVALQGDL TSAAAMERLF ADAVAAVGRP DIAINTVGKV LKKPMLEISE AEYDEMSAVN
AKSAFFFLKE AGRNVNDGGR ICTLVTSLLG AFTPFYSSYA GTKAPVEHFT RAASKEFGER
GISVTAIGPG PMDTPFFYPA ESADAQAYHK TAAALSAFTR TGLTDIADIV PWIRFLVTDG
WWMTGQTILV NGGYTTK