Gene Smal_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3336 
Symbol 
ID6476464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3744450 
End bp3745511 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content68% 
IMG OID642732534 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002029718 
Protein GI194367108 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCTG AGATCGTTGT ACTCCCCGGT GATGGCATCG GCCCGGAAGT GGCCGCCGCT 
GCGGTTGCCG TCCTGAACGC CGTCGCCGAA CGCTTCAACC ACAGCTTCAC CTTCAGCGAG
CACGACATCG GTGGCATCGC CATCGATCGC CATGGCGAGC CGCTGCCGGC CGCCACCCTC
ACCGCCTGCC AGGCTGCCAA CGCGGTGCTG CTGGGCGCGG TGGGTGGCCC GAAGTGGTCC
GATCCGAATG CCAAGGTGCG CCCGGAACAA GGCCTGCTGG CGATCCGCAA GGCGCTGGGC
CTGTACGCCA ACCTGCGCCC GGTGCGCACT CATGAAGCCG CGCTGCACGC CTCGCCGATC
AAGGCCGAGC TGCTGCAGGG CGTGGACTTC GTGGTGGTGC GCGAACTGAC CGGAGGCATC
TACTTCGGCG ACAAGACCCG CGACGCCGAC AGTGCCAGCG ACCTGTGCCG CTACACCGTG
GCCGAGATCG AGCGCGTGCT GCGCAGTGCG TTCCGCCTGG CGCAGCAGCG CCGCGGCAAG
GTCACCTCGG TGGACAAAGC CAACGTGCTG GAAACCTCGC GCCTGTGGCG TGACGTGGCT
GCACGCATCG GCCGCGAGGA GTTCCCGGAC GTTGCCCTGG AGCACCAGCT GGTCGATTCG
ATGGCGATGC ACCTGCTGGC AAAGCCGCGC GAGTACGACG TGATCGTGAC CGAGAACATG
TTCGGCGACA TCCTCACCGA CGAAGCCTCG ATGCTGGCCG GCTCGCTGGG CCTGCTGCCG
TCGGCCTCGC TGGGCGAGCC CGGTGCGGTC GGCATCTACG AACCGATCCA CGGTTCGGCC
CCGGACATCG CCGGCAAGGG CATCGCCAAC CCATACGCGA CGATCTTCAG CGCCGCGATG
CTGCTGCGCC ATTCGCTGGG GCTGGAAGCG GAAGCCGCTG CGGTGGAAGC GGCCGTGCAT
GCAGTGCTGG ACGATGGCGT GTTCACCGCC GATCTGGCCG CGAAGGGCCA GGCGGTGAGT
ACCGCCGCAG CCACGGATGC GGTGCTGGCC AGGCTGGCCT GA
 
Protein sequence
MHAEIVVLPG DGIGPEVAAA AVAVLNAVAE RFNHSFTFSE HDIGGIAIDR HGEPLPAATL 
TACQAANAVL LGAVGGPKWS DPNAKVRPEQ GLLAIRKALG LYANLRPVRT HEAALHASPI
KAELLQGVDF VVVRELTGGI YFGDKTRDAD SASDLCRYTV AEIERVLRSA FRLAQQRRGK
VTSVDKANVL ETSRLWRDVA ARIGREEFPD VALEHQLVDS MAMHLLAKPR EYDVIVTENM
FGDILTDEAS MLAGSLGLLP SASLGEPGAV GIYEPIHGSA PDIAGKGIAN PYATIFSAAM
LLRHSLGLEA EAAAVEAAVH AVLDDGVFTA DLAAKGQAVS TAAATDAVLA RLA