| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3323 |
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| Symbol | |
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| ID | 6476451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3725643 |
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| End bp | 3727967 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642732521 |
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| Product | transcriptional regulator domain protein |
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| Protein accession | YP_002029705 |
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| Protein GI | 194367095 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0826316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.463581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA GCGAATTCCT GCCCGTCGAG GCCGACCGTA TCCAGGTTGG CGACTGCGTC
ATCACCTTGT CCTCGCGAGA GGTCGAGGTC GAAGGCGCAC GTCGACCTCT CCGGTTGACG
CCGAAGGCGC TGGGCGTGCT GCGGGTGCTG ATGCGTCAGC CGGGGCGGGT CGTGACCCGT
GAAGAGCTGT TTGCAGAAGT CTGGCCCGAT ACGCTGCCCA CCAATGACGT GCTGACCCAG
GCGGTCACCC AGCTACGCAA GGTGTTCGCC AATGACGACG ACAATGGCCA GGCCTACATC
GAGACCATCG CCAAGAGCGG CTATCGCCTG TTGGTGCCGG TGCTGGTGCT GGATGACGTG
GCGCCTGTCG TGGAGGTTGA TGCGGTCCCT GAGGTGATGC CCGCGCTGGC AGGTGCCAGT
GCGATTCCGA CGGCGACGGT GTTGCCGGCT CCTTCACGGC GCAGTGGATG GCGGCAGTTG
CGCCGGCAAC TGCTGTGGGT GCTGGGTGTG CTGATGCTGG CCGCGCTGGT GGTCATGGCC
ACGCTGCTGT TGCGCCGCGG ACCGGAAACG AGTTCGCCAG TGGATGCGGC GGTCGAGAAC
GGTGTGCGGG TGATCGGCAG CCCGCAGCGC CCCTATCGCT TGATCACTGC GACCAGTGGT
TTTGAGACGT ATCCCACGCT TTCGCCGGAT GGCTCGCAGG TTGCCTATGA AGGCGCCAAC
GAGGACGGTG CCGGCGGCGG CGCGATCAAG GTGCAGACGT CCGGTAATGC CCCGGCCAGG
CAGCTGGCGC TGCCACCCAA GGGTGCCAGT GACCGTTTCC CGAGCTGGTC GCCGGATGGG
CGCGAGATCG CTTTTGCCCG TTTCAGTGCC GATGGGGGGT GCCAGGTATT GATCGCCAGC
GCGACCGGAG GCGTCGTGCG CCAGGCCACG CGCTGCGACG GAACCGAGCT GCTGAGTTTC
GACTGGACCC CCGATGGCCG TGGCCTGGTC TTCGGCAGCA TGGTGGGCCG CTACGCCCAT
CGTGGTATCC GCGTGCTCGA CCTGGCCAGC GGGCAATGGC GCGCGCTGGC GTATGAGGTT
GACCAGGATG ATTTCGACTA CGCGCCGCGT TACTCGCCCG ACGGCAAGTG GCTGGTGTTT
GTCCGCAACC CGCAGATGGG CGACCTCTGG CGGATGCCAG CAGGCGGCGG TGCGCTGGAA
CAACTGACCA ACGAGTCCGC CGAGCAGCGC GGCTGGGCCT GGCTGGGCGA CGGGCGCAGC
ATCGTGTTCG GCCGCCGCGT CGACAGCGAG GTGCGCCTGT ACTACCTGGA TGTCGAGCGG
CGTACGCTGC GTGATGCCGG CCTTGATGAC GCGCAATGGC CGACGGTGTC ACGCCATGGT
GACGTGTTGG CTTTCGTCCA TCGCCGTGCA CAGTTCGGTG TGTTCAGGAT GCCGATGGCA
GGCGGGGGCG CCGAACGCCT GTTCGCCTCC AGTGGGCGTG ACGGTCAGCC GATGGCAGCG
CCCGATGGCC GCCAGCTGGT CTTCACCTCC GACCGCTCCG GCAGTTTCGC CTTGTGGTGG
GCCGACATGC AGCGGCCGGA TTCGCTGCGG CCGATCGAGG GGTTGCGGCC GGAAGGCCGG
CAGGCGCCGG ACTGGTCGGC TGACAGCCGC CAGTTGCTGG TGGTCGGTCG TGACGAGCAC
GGGCGCACCG TGGTCTACGA AATCGCACCG CGTGACGAAC GCCTGCAGCC GCTGCCGGTT
CCGGTCGAAC AGCCATTGCA GGCGCTGTAT GGGGCGACCC CCGGACAGCT GCTGGTGGTC
GAGCGCGATG CCGAGCAGCG CACCCGGTTG AGCCTGTTTG ATCGCAGCGT GACCCCCTGG
CGCCGGTTGG CCAGCATTGA TGGCGTCTCC CAGGCCCGTT TCGATCGCGG TGGCGGCCGG
GTGTTGTTCA CCCGGCTGGC GTCCGGTGGC TTGTGGTCGG TGGACGCGTC GCTGTCCCCG
GCCAGCGTGC AGCAGGTCAG TGAAGACCGG CCCAGCCGGT GGCGCTATCG GACCTGGACC
GTGGCTGGCG CGGGTGGCAT TGGCTATCTC GGTACCTCTG CCGAGTGCGG TACCACTCTG
GTCCATATCC AGGCCGGCAA GGAAGCGCCC GAACGCTGCC TGGATCGACA GCGCCTCAGT
GCGGGCAACG GCATCAGTGC CAGTGCCGAT GGACGCGATC TGTTCGTCGC CCTGGCGATC
AGTGATGGCG CCGACATCGG CGTAATGCAG CTGCCCAAGC CCGCCCCGAC GCTGTTCCCG
GCATTCCTCA ACTCGTTGAT ACTGAAGAAG AATATTTCTT CGTGA
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| Protein sequence | MNSSEFLPVE ADRIQVGDCV ITLSSREVEV EGARRPLRLT PKALGVLRVL MRQPGRVVTR
EELFAEVWPD TLPTNDVLTQ AVTQLRKVFA NDDDNGQAYI ETIAKSGYRL LVPVLVLDDV
APVVEVDAVP EVMPALAGAS AIPTATVLPA PSRRSGWRQL RRQLLWVLGV LMLAALVVMA
TLLLRRGPET SSPVDAAVEN GVRVIGSPQR PYRLITATSG FETYPTLSPD GSQVAYEGAN
EDGAGGGAIK VQTSGNAPAR QLALPPKGAS DRFPSWSPDG REIAFARFSA DGGCQVLIAS
ATGGVVRQAT RCDGTELLSF DWTPDGRGLV FGSMVGRYAH RGIRVLDLAS GQWRALAYEV
DQDDFDYAPR YSPDGKWLVF VRNPQMGDLW RMPAGGGALE QLTNESAEQR GWAWLGDGRS
IVFGRRVDSE VRLYYLDVER RTLRDAGLDD AQWPTVSRHG DVLAFVHRRA QFGVFRMPMA
GGGAERLFAS SGRDGQPMAA PDGRQLVFTS DRSGSFALWW ADMQRPDSLR PIEGLRPEGR
QAPDWSADSR QLLVVGRDEH GRTVVYEIAP RDERLQPLPV PVEQPLQALY GATPGQLLVV
ERDAEQRTRL SLFDRSVTPW RRLASIDGVS QARFDRGGGR VLFTRLASGG LWSVDASLSP
ASVQQVSEDR PSRWRYRTWT VAGAGGIGYL GTSAECGTTL VHIQAGKEAP ERCLDRQRLS
AGNGISASAD GRDLFVALAI SDGADIGVMQ LPKPAPTLFP AFLNSLILKK NISS
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