| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3322 |
|---|
| Symbol | |
|---|
| ID | 6476450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3724629 |
|---|
| End bp | 3725528 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642732520 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002029704 |
|---|
| Protein GI | 194367094 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0422488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.482984 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCAAC TCTCGCTGGC CGATCGCGGC CAAACCGTTT CCCTCGACAA GGCCCTCGAC
GATGTTGCGC CGACCTGCAT GGGCGTGGCC CGGCTGGGCA GCCTGCAGAC TGCAGGCACC
AGCTTCACGG TCTGGCTTCA GGTCCGGGGC AATTCCTGGG TCGAGGCCAA GGAAGGACGC
TTCCGCCTGC GCCACGGGGA GTGGATCGCC TTCGAGAAGG AGTCGCGTCC GCTGGTCCAG
GCAGGACGCA GCAGCCTGTG CGTTGGCCTG AACCTGAACG CCGAAGCGCT GCGTGTACTG
TCCGAGATGG CCGACTGCGG CCTGTATGCG GGCCGTGGTC GCATGAGCCG CGGCGACGCC
CGGGTTGCCC TGCGCCTCTG GCGCGATGCC TTGGCCAGCG GCATGCCGGC ACAGGCGCTG
CGCCCATTGC TGCTGCATCT GGCGGGCCTG CAGCGTGGGC TGGCCGACAA TGTGCAGCGC
TGCCCGGGCC GGTCACGCAG CCGCAAACGC CAGGTCTTTG GCCGCATGCA GCGCGCCCGC
CTGTATCTGG AAGGCAACAG TCACCGGGTG GTGCGCATCG GCGAGCTGGC CGAGCTGACC
AATTTCTCCA GCTGGTACCT CTCCAAGACG TTCCAGAGCC TGTACGAAGA GAGCCCCCAA
TCGCTTTCGG CGCGGTTGCG CCTGGAGCGG GCAGCCGACC TGCTGCGCGA TACCGACATG
ATGGTGGGAG AAGTCGCCGC GGCGAGCGGA TTCGACAACT GCTGCAGTTT CGCGCGTGCC
TTCCGGGCCC GCTACGGCCA GTCGGCCTCC CGCTTCAGGG AAAACGACGG CTTGCTCCCG
CCACATTCTG CAAAGTCTCC GGTTGGGTCG CGCAAATACA GCGTCGCAAC GCAATCGTAA
|
|---|
| Protein sequence | MRQLSLADRG QTVSLDKALD DVAPTCMGVA RLGSLQTAGT SFTVWLQVRG NSWVEAKEGR
FRLRHGEWIA FEKESRPLVQ AGRSSLCVGL NLNAEALRVL SEMADCGLYA GRGRMSRGDA
RVALRLWRDA LASGMPAQAL RPLLLHLAGL QRGLADNVQR CPGRSRSRKR QVFGRMQRAR
LYLEGNSHRV VRIGELAELT NFSSWYLSKT FQSLYEESPQ SLSARLRLER AADLLRDTDM
MVGEVAAASG FDNCCSFARA FRARYGQSAS RFRENDGLLP PHSAKSPVGS RKYSVATQS
|
|---|
| |