Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3321 |
Symbol | |
ID | 6476449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3721616 |
End bp | 3724579 |
Gene Length | 2964 bp |
Protein Length | 987 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642732519 |
Product | TonB-dependent receptor |
Protein accession | YP_002029703 |
Protein GI | 194367093 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0185531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.64896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTTC GCACCCCTGC TGTGCGGTTG GGCCTGCTGC CCGCCGGCAT CGCACTGGCG CTTGCCCCGG CATTTGCTTC CGCCCAGGAA GCCAGTGCCC CCACCACCCT TGATCGCCTG GAAGTCACCG GCTCCCGCAT CCGCTCGGTG GATGTGGAAA CCTCCCAGCC GGTCCTCACC GTAAGCCATG AGGACATTCA GCGTTCGGGC CTGGTCAGCG TCGGCGACCT GCTGCAGAAC CTGTCCGTGG CAGGCACCCA GACCTTCAGC AAGGCGGCCG TGCTGGCGTC CAACCCGGAA CAGGGCGGCC AGTACGTCAG CCTGTACAAC CTGGGTGAGC AGCGCACGCT GGTGCTGGTC AACGGCAAGC GCTGGAGCAC CAGCCTGGCC GGCTTCACCG ACATGTCGAC CATCCCGACC TCGCTGATCG AGCGCATTGA AGTCCTGAAG GACGGCGCCT CGGCGATCTA CGGTTCCGAC GCCATCTCCG GCGTGGTCAA CATCATCCTG CGCAAGAACT TCGACGGCGC CGAGGCCAGT GCCTATTACG GCCAGAACAG CCACGGCGAC GGTTCCAAGA CCCAGTACAG CCTGACCCTG GGTGCCACCG GCGAGCGCTC CTCGATCGTG TTCGGCGCGA ACTACATCAA GGAAGATCCG GTGTGGGCCA AGGATCGTGG CCTGACCCAG TACTCCTATG GCCAGGGCCA CAAGGAAGAC GGTCTGAGCC CGGCGGGCCC GTGGGGCCGC TTCACCGATC CGCGTGCCGA AGGCACCGCC GGTGCTGGTG AATACAACAA GGCTGGCAAG TGGGTCCCGA ACACCTGGGT GGTCAACCAC ACCGGTTCGT GGGACACCCC GGTCGGCGTT GGCCAGCCGT CGAACAACTT CAACAACTAC CACCTGATTG GTCTGGACGA CTACTACAAC GCCTCGCAGC AGATGATGCT GAACCAGGGC GCTGAGTCGA AGACCATGTT CACCTCGGCC AGCTACGACA TCAACGACAA CCTGCGTCTG AAGTCGACGG CGATGTACTC CGAGCGTGAC TCCAAGCGCC AGATCGCCGG CTACCCGCTG ACCGGCACCT CGCAGCCGCA GTTCCCGGTG GCGATCAGCA AGGACAGCAT CTACAACCCG CTGGGCAACT GGGCCAACCC GGGCGCCGGC GTTGACATCG GTGGCTGGGG CCGTCGTATC TTCGAACTGC CGCGCATCAC CCAGAACAAC GTCAAGTCGC TGCACTTCGA CGCGGCCCTG GAAGGCAACT TCGACTTCAA CAACCGTCCG TTCGACTGGG ATGTGGGCAT CAACTACAAC CAGTTCGATG TGACCCAGAC CAGCTCGGGC AACATCAACC TGCTGGCACT GAAGAACGCC CTCGGCCCGT CGTTCATCAA CGCCAACGGC GTCGCCCAGT GCGGCACCGC TGCCAACCCG ATCGCGCTGG GCACCAGCCC GGGCAGCTGC GTCCCGTTCG ACCTGCTGGG CGGCGCCAGC GCCGCGACCC CGGATGCGCT GAAGTACATC AACACCCTGC TGAACTCGAC CGGCCAGAGC AAGAGCAAGC AGTACTTCGC CAACATCACC GGTTCGTTGT TCGACATGCC GGGCAATGCG GGCGAGTTCG CCTTCGCTGC CGGTTACGAG CATCGTGAAG TGTCGGGCTA CGACCACCCG GACGCGCTGT CCTCCTCGGG TTACACCACC GAGCTGGCCG CCCAGCCGAC CGAAGGCAAG TACAAGACCA ACGAGTTCTA CCTGGAACTG ATGGTGCCGC TGCTGCGTGA CCTGCCGGGT GCCAAGGAGC TGTCGCTGGA TATCGCCAGC CGCTACTCGG ACTACGACAA GTTCGGCAAC ACGGTCAACA GCAAGTTCAG CGTGACCTGG AAGCCGATCG ACGACCTGCT GGTGCGTGCG ACCTACGGCG AGGGCTTCCG TGCCCCGACC CTGGACGACA CCTTCGGCGG TGGTTCGCAG ACCTTCGACA AGTTCACCGA TCCGTGTGAT GCCGTGTTCG GCCAGCGCAG CAACCCGGCC GTTGCCGCCC GTTGCGGTGC TGAAGGCCTG GCGTCCGACT TCCGTCAGAC CGACGCTGCT GGTCGTCCGA TCAGTGCCCG TGACACCCAG GGCAACAACC CGTTCAACTC GGGCGTGGGC AACGACAAGC TGCAGCCGGA AACCAGCAAG ACCCGCACCG CGGGCCTGGT GTGGAGCCCG AGCTTCGTCA GCGGCCTGAA CGTCTCGCTG GACTGGTACA AGATCACCGT GGACAACGTG ATCACCGCGC TGTCGGCGAA CTACGTGCTG AACCAGTGCT ACCAGAACGG TGTGCAGGCC TTCTGTGACC AGTACAGCCG TGGCGACGTT GCCAATGGCC AGCAGGTCAC CGGCCTGAGC CGCGGCAATG CCAACCTGGG TTCGCTGGAA ACCGAAGGCT ACAACTTCGG CGTCCGCTAC CGTATGCCGG AATACAGCTT CGGTACCCTG TCGTTCAACC TGGACACCAA CTACCTGACC AGCTTCCGTC AGCAGGCCAC CAAGGGCGCT GCATGGGATG ACTACGCAGG CTACTGGAAC TACCCGCGTG TCCGCGGCAC CCTGGCAACC ACCTGGACCA AGGGCGACCT GTCGGCCACC TGGACCATGC GTTACTACGG CGGCTTCCGC GACTTCTGCT ACGACCAGGA AAATGGCCTG GAGTGCAACC AGCCGGATTA CTACACCGAG AACGGTGGCT GGACCGGCGG CCTGGGTGCC AACAAGAAGG GTGCGATCGT CTATCACGAC ATCTCGGCCA CCTGGCAGGC TCCGTGGAAC GGCAGCGTGA CCGTCGGTGC CCGCAACGTG TTCGGCAAGA CCCCGCCGAT CACCTACGCG GTGACCAACG CCAGCGCCGT GCAGCTGGAC CCGATGCTGG ATTACGACCG CTTCCTGTTC ATCCAGTACA ACCAGCGCTT CTGA
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Protein sequence | MNVRTPAVRL GLLPAGIALA LAPAFASAQE ASAPTTLDRL EVTGSRIRSV DVETSQPVLT VSHEDIQRSG LVSVGDLLQN LSVAGTQTFS KAAVLASNPE QGGQYVSLYN LGEQRTLVLV NGKRWSTSLA GFTDMSTIPT SLIERIEVLK DGASAIYGSD AISGVVNIIL RKNFDGAEAS AYYGQNSHGD GSKTQYSLTL GATGERSSIV FGANYIKEDP VWAKDRGLTQ YSYGQGHKED GLSPAGPWGR FTDPRAEGTA GAGEYNKAGK WVPNTWVVNH TGSWDTPVGV GQPSNNFNNY HLIGLDDYYN ASQQMMLNQG AESKTMFTSA SYDINDNLRL KSTAMYSERD SKRQIAGYPL TGTSQPQFPV AISKDSIYNP LGNWANPGAG VDIGGWGRRI FELPRITQNN VKSLHFDAAL EGNFDFNNRP FDWDVGINYN QFDVTQTSSG NINLLALKNA LGPSFINANG VAQCGTAANP IALGTSPGSC VPFDLLGGAS AATPDALKYI NTLLNSTGQS KSKQYFANIT GSLFDMPGNA GEFAFAAGYE HREVSGYDHP DALSSSGYTT ELAAQPTEGK YKTNEFYLEL MVPLLRDLPG AKELSLDIAS RYSDYDKFGN TVNSKFSVTW KPIDDLLVRA TYGEGFRAPT LDDTFGGGSQ TFDKFTDPCD AVFGQRSNPA VAARCGAEGL ASDFRQTDAA GRPISARDTQ GNNPFNSGVG NDKLQPETSK TRTAGLVWSP SFVSGLNVSL DWYKITVDNV ITALSANYVL NQCYQNGVQA FCDQYSRGDV ANGQQVTGLS RGNANLGSLE TEGYNFGVRY RMPEYSFGTL SFNLDTNYLT SFRQQATKGA AWDDYAGYWN YPRVRGTLAT TWTKGDLSAT WTMRYYGGFR DFCYDQENGL ECNQPDYYTE NGGWTGGLGA NKKGAIVYHD ISATWQAPWN GSVTVGARNV FGKTPPITYA VTNASAVQLD PMLDYDRFLF IQYNQRF
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