Gene Smal_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3321 
Symbol 
ID6476449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3721616 
End bp3724579 
Gene Length2964 bp 
Protein Length987 aa 
Translation table11 
GC content64% 
IMG OID642732519 
ProductTonB-dependent receptor 
Protein accessionYP_002029703 
Protein GI194367093 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4206] Outer membrane cobalamin receptor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0185531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.64896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTC GCACCCCTGC TGTGCGGTTG GGCCTGCTGC CCGCCGGCAT CGCACTGGCG 
CTTGCCCCGG CATTTGCTTC CGCCCAGGAA GCCAGTGCCC CCACCACCCT TGATCGCCTG
GAAGTCACCG GCTCCCGCAT CCGCTCGGTG GATGTGGAAA CCTCCCAGCC GGTCCTCACC
GTAAGCCATG AGGACATTCA GCGTTCGGGC CTGGTCAGCG TCGGCGACCT GCTGCAGAAC
CTGTCCGTGG CAGGCACCCA GACCTTCAGC AAGGCGGCCG TGCTGGCGTC CAACCCGGAA
CAGGGCGGCC AGTACGTCAG CCTGTACAAC CTGGGTGAGC AGCGCACGCT GGTGCTGGTC
AACGGCAAGC GCTGGAGCAC CAGCCTGGCC GGCTTCACCG ACATGTCGAC CATCCCGACC
TCGCTGATCG AGCGCATTGA AGTCCTGAAG GACGGCGCCT CGGCGATCTA CGGTTCCGAC
GCCATCTCCG GCGTGGTCAA CATCATCCTG CGCAAGAACT TCGACGGCGC CGAGGCCAGT
GCCTATTACG GCCAGAACAG CCACGGCGAC GGTTCCAAGA CCCAGTACAG CCTGACCCTG
GGTGCCACCG GCGAGCGCTC CTCGATCGTG TTCGGCGCGA ACTACATCAA GGAAGATCCG
GTGTGGGCCA AGGATCGTGG CCTGACCCAG TACTCCTATG GCCAGGGCCA CAAGGAAGAC
GGTCTGAGCC CGGCGGGCCC GTGGGGCCGC TTCACCGATC CGCGTGCCGA AGGCACCGCC
GGTGCTGGTG AATACAACAA GGCTGGCAAG TGGGTCCCGA ACACCTGGGT GGTCAACCAC
ACCGGTTCGT GGGACACCCC GGTCGGCGTT GGCCAGCCGT CGAACAACTT CAACAACTAC
CACCTGATTG GTCTGGACGA CTACTACAAC GCCTCGCAGC AGATGATGCT GAACCAGGGC
GCTGAGTCGA AGACCATGTT CACCTCGGCC AGCTACGACA TCAACGACAA CCTGCGTCTG
AAGTCGACGG CGATGTACTC CGAGCGTGAC TCCAAGCGCC AGATCGCCGG CTACCCGCTG
ACCGGCACCT CGCAGCCGCA GTTCCCGGTG GCGATCAGCA AGGACAGCAT CTACAACCCG
CTGGGCAACT GGGCCAACCC GGGCGCCGGC GTTGACATCG GTGGCTGGGG CCGTCGTATC
TTCGAACTGC CGCGCATCAC CCAGAACAAC GTCAAGTCGC TGCACTTCGA CGCGGCCCTG
GAAGGCAACT TCGACTTCAA CAACCGTCCG TTCGACTGGG ATGTGGGCAT CAACTACAAC
CAGTTCGATG TGACCCAGAC CAGCTCGGGC AACATCAACC TGCTGGCACT GAAGAACGCC
CTCGGCCCGT CGTTCATCAA CGCCAACGGC GTCGCCCAGT GCGGCACCGC TGCCAACCCG
ATCGCGCTGG GCACCAGCCC GGGCAGCTGC GTCCCGTTCG ACCTGCTGGG CGGCGCCAGC
GCCGCGACCC CGGATGCGCT GAAGTACATC AACACCCTGC TGAACTCGAC CGGCCAGAGC
AAGAGCAAGC AGTACTTCGC CAACATCACC GGTTCGTTGT TCGACATGCC GGGCAATGCG
GGCGAGTTCG CCTTCGCTGC CGGTTACGAG CATCGTGAAG TGTCGGGCTA CGACCACCCG
GACGCGCTGT CCTCCTCGGG TTACACCACC GAGCTGGCCG CCCAGCCGAC CGAAGGCAAG
TACAAGACCA ACGAGTTCTA CCTGGAACTG ATGGTGCCGC TGCTGCGTGA CCTGCCGGGT
GCCAAGGAGC TGTCGCTGGA TATCGCCAGC CGCTACTCGG ACTACGACAA GTTCGGCAAC
ACGGTCAACA GCAAGTTCAG CGTGACCTGG AAGCCGATCG ACGACCTGCT GGTGCGTGCG
ACCTACGGCG AGGGCTTCCG TGCCCCGACC CTGGACGACA CCTTCGGCGG TGGTTCGCAG
ACCTTCGACA AGTTCACCGA TCCGTGTGAT GCCGTGTTCG GCCAGCGCAG CAACCCGGCC
GTTGCCGCCC GTTGCGGTGC TGAAGGCCTG GCGTCCGACT TCCGTCAGAC CGACGCTGCT
GGTCGTCCGA TCAGTGCCCG TGACACCCAG GGCAACAACC CGTTCAACTC GGGCGTGGGC
AACGACAAGC TGCAGCCGGA AACCAGCAAG ACCCGCACCG CGGGCCTGGT GTGGAGCCCG
AGCTTCGTCA GCGGCCTGAA CGTCTCGCTG GACTGGTACA AGATCACCGT GGACAACGTG
ATCACCGCGC TGTCGGCGAA CTACGTGCTG AACCAGTGCT ACCAGAACGG TGTGCAGGCC
TTCTGTGACC AGTACAGCCG TGGCGACGTT GCCAATGGCC AGCAGGTCAC CGGCCTGAGC
CGCGGCAATG CCAACCTGGG TTCGCTGGAA ACCGAAGGCT ACAACTTCGG CGTCCGCTAC
CGTATGCCGG AATACAGCTT CGGTACCCTG TCGTTCAACC TGGACACCAA CTACCTGACC
AGCTTCCGTC AGCAGGCCAC CAAGGGCGCT GCATGGGATG ACTACGCAGG CTACTGGAAC
TACCCGCGTG TCCGCGGCAC CCTGGCAACC ACCTGGACCA AGGGCGACCT GTCGGCCACC
TGGACCATGC GTTACTACGG CGGCTTCCGC GACTTCTGCT ACGACCAGGA AAATGGCCTG
GAGTGCAACC AGCCGGATTA CTACACCGAG AACGGTGGCT GGACCGGCGG CCTGGGTGCC
AACAAGAAGG GTGCGATCGT CTATCACGAC ATCTCGGCCA CCTGGCAGGC TCCGTGGAAC
GGCAGCGTGA CCGTCGGTGC CCGCAACGTG TTCGGCAAGA CCCCGCCGAT CACCTACGCG
GTGACCAACG CCAGCGCCGT GCAGCTGGAC CCGATGCTGG ATTACGACCG CTTCCTGTTC
ATCCAGTACA ACCAGCGCTT CTGA
 
Protein sequence
MNVRTPAVRL GLLPAGIALA LAPAFASAQE ASAPTTLDRL EVTGSRIRSV DVETSQPVLT 
VSHEDIQRSG LVSVGDLLQN LSVAGTQTFS KAAVLASNPE QGGQYVSLYN LGEQRTLVLV
NGKRWSTSLA GFTDMSTIPT SLIERIEVLK DGASAIYGSD AISGVVNIIL RKNFDGAEAS
AYYGQNSHGD GSKTQYSLTL GATGERSSIV FGANYIKEDP VWAKDRGLTQ YSYGQGHKED
GLSPAGPWGR FTDPRAEGTA GAGEYNKAGK WVPNTWVVNH TGSWDTPVGV GQPSNNFNNY
HLIGLDDYYN ASQQMMLNQG AESKTMFTSA SYDINDNLRL KSTAMYSERD SKRQIAGYPL
TGTSQPQFPV AISKDSIYNP LGNWANPGAG VDIGGWGRRI FELPRITQNN VKSLHFDAAL
EGNFDFNNRP FDWDVGINYN QFDVTQTSSG NINLLALKNA LGPSFINANG VAQCGTAANP
IALGTSPGSC VPFDLLGGAS AATPDALKYI NTLLNSTGQS KSKQYFANIT GSLFDMPGNA
GEFAFAAGYE HREVSGYDHP DALSSSGYTT ELAAQPTEGK YKTNEFYLEL MVPLLRDLPG
AKELSLDIAS RYSDYDKFGN TVNSKFSVTW KPIDDLLVRA TYGEGFRAPT LDDTFGGGSQ
TFDKFTDPCD AVFGQRSNPA VAARCGAEGL ASDFRQTDAA GRPISARDTQ GNNPFNSGVG
NDKLQPETSK TRTAGLVWSP SFVSGLNVSL DWYKITVDNV ITALSANYVL NQCYQNGVQA
FCDQYSRGDV ANGQQVTGLS RGNANLGSLE TEGYNFGVRY RMPEYSFGTL SFNLDTNYLT
SFRQQATKGA AWDDYAGYWN YPRVRGTLAT TWTKGDLSAT WTMRYYGGFR DFCYDQENGL
ECNQPDYYTE NGGWTGGLGA NKKGAIVYHD ISATWQAPWN GSVTVGARNV FGKTPPITYA
VTNASAVQLD PMLDYDRFLF IQYNQRF