| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3314 |
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| Symbol | |
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| ID | 6476442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3713924 |
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| End bp | 3716845 |
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| Gene Length | 2922 bp |
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| Protein Length | 973 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642732512 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002029696 |
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| Protein GI | 194367086 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.510297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACT CCCATCGTCC GGGCCGCGTG CTGCGCCCGT CCCGCCTGTG CATCGCGTTG
CTGGCTGTCG GCCTCGCCTG CGCCGCACCA TCGTCCGTAC TGGCGCAGAG TGCTGCCAGC
GGCCATGCGG CCCTGCAGCG TTTCGACATT CCCGCGCAGC CGCTTGATGA AGCGCTGCGC
AGCTACATGC GCCAGTCCGG TGTGCAGGTG GTGTATCCGG CCACGCTGGC CCAGGGCGTG
AGCTCGCACG CGGTCAGCGG TAACCTGTCT TCCGATGAGG CCCTGGCTCG CCTGCTGCAG
GGCAGTGGCC TGGCGGTGCG CCGGGTCGGC ACCGATGCGG TCACCCTGGA ATCGGCAACT
CCCGTGCAGG CCGACAGCGG CGTGATCGTC ACCGACACGC TGAGCGTGGC CGGCGACCGC
GTCGACAGTG GCGCAACCAG CGACGAGGCG CGCCTGCTCG ACGGCTATCG CAGCGTCGGC
TCCACCACCA CGCTCAACCG CACCCACCTG GAGCGATTCC GCGGTACGTC CAACGGCGAC
ATCGTCAAGG GCGTGGCTGG CGTCACCGCC GGTGATCCGC GCGTGGGCAA CGGCTTTGAC
GTCAACATCC GTGGCATCCA GGGCCAGGGC CGCGTGCCGG TGATCATCGA CGGTGGCCAG
TCCAGCATGG ATACCTACCG TGGTTATGCC GGCCAGTCGC AGCGCACCTA CCTCGACCCG
GACCTGATCT CCAGCCTGAC CATCACCAAG GGCCCGAGTC TGCAGGCCAA TGCCTCCGGT
GGCATCGGCG GCGTGGTCGA GATGGAGACG CTGAAGATCG GTGACGTGCT GCGCGAAGGG
CGGGACTTCG GCGTGCGCGT GCGTGGCGGC CTGGCCAACA ACAGCGCCAA CAACCTGCCT
TCCTACAGTG CCGCGCCGCG CAACGATCGC AGCGCCACCG GCAGCCAGTT CTTCAACGTG
GCCGCGGCCG GTCATTGGGA TCGTTTCGAT CTCGTGGCCG CCTATGCCTA CCGTGACAAT
GGAAACTACT TCTCCGGCAA GCACGGCTAC GACGATTTCC CGCAGACCCG GCGCACGCTG
GCACCGCTGA ATCCGCCGCG TACCGAGGTC TTCAATACCT CGGCGCGCTC GAAGTCGGCG
CTGCTCAAGG GCACCTGGCG CATCGACGAT GCACAGATGC TGGAAGCGGG CTACCGCCGC
TACGAGGGCA CCGCCGGCGA GATCATGGCC TCGCAGATCA TCCGCGTCGA TCGCGACCGC
ATTCCGCAAT GGGATCCGGG CCACGTCGAC ATGGACAGCT ACACCCTGCG CTATCGCTTC
AACCCGGACA GCGAGCTGGT CGACCTGCGC GTCAATGCCG CGTACACCGA CACCGACAGC
GTGATGTACA ACAGCCTGAC CGGCATCACC CCGTGGTACT TCGATCGCCG CACCGAGTGG
TACGACGCGC CCAGCTTCAG TGGCGACCCC GGCTACAAGG ATGCGTACCG CAACCCGCTG
CGACAGAAGC GCTTCGGCCT GGATGCCAGC AATACCTCGA AGTTCGACAC TCGTGCCGGC
GCGTTCACCC TCGACTATGG CCTGTCCTAC AGCGACGAAG ACATCGCGCC GGGCAGTTCG
GGGCCGGTCA TGCACGACGA TCTGATCAAC AACCGTTTCC TGCGCAACGC CGAGCGCAAG
GAATACAGTG CCGTGGCCTC GCTGAAGTGG CAGCCCGATG AGCATTGGGA ACTGCTGGCC
GGCGGCCGCT GGAACCGCGT GGATGTGCAT GACCGCAACC GCCTGGCCAC GCCCGATGCC
TATGAGGTGC AGGGCCAGTA CCGCTACACC GAACTGCTCA ACGGCAACCC GGCGTTGCCG
TCGTGGCGGG CCAAGCGCAT CGCGCTGCTG AACTGGTATC CGGATGCCAA CGGCAACTTC
ACCCAGGAAT CGCTGCTGGC CTCACCGTAC AAGAAGGGTA CGGTGGGCGA CATCGGTGGC
TGGAACTTCT ACGACGCCGG CAAGGCGCAG GACCTGGAAG TGCCGGTCAG CTGGACCTGG
TCGCAGCCGA TCCGCCGTCG TGACACCGCG TTCTCGCCGA CCGCCAGCGT GGCTTACCGC
TTCAGCGAAG ACACCATGGT CTATGTGAAG TACGCCGAAG GCACCAAGCT GCCGAGCCTG
TTCGAGACCA CGCTGGGCCT GTTCACTGCC GCCAAACCGG TGGGCGAGCT GAAGCCGGAG
CGCGCGCGCA GCTGGGAAAT CGGCGCCAGT ACCATCCGCT ACGACCTGTT CACTGCCGGC
GACCGCCTGG CACTGAAGCT GGCCTACTTC GATACCCGCA TCGATGACCT GATCACCCGC
GACTACCGCA CGCTGTCGGC CGGCCTGATC CGCAACGTCG ACCAGTTCAA GGTCTCGGGC
ATGGAGTTCC AGTCCAGCTA TGACAGCGGC AAGGTATTTG CGGATCTGTC CGCGCACTAC
TACTTCAAGG CCAAGACCTG TGCACCGGAC ATCGCCGCCG AGCGCCGTGC CTATGGGGCA
CAGCGCAGGA ACGATGAGCT GGCCAACACG CCCAACTGCG TGGACGGTGG CTTCGAGGGC
TCGTACACCA ATACCCAGAA TCCGCCGCGC TACATGGTCA ACCTGACCCT GGGCTCGCGC
CTGTTCGACG AGCGCCTGAC CTTCGGCACC CGCGTGGTCC ACAACGCCGG CCCGATCAGC
AAGCTGGACA AGGACTGGAA CGTGGGCCTG TCGGCGATCC AGCAGCTGTA CCGGCCGACT
ACCCTGGTCG ACCTGTTCGC CAGCTGGAGC TTCAACGACC AGCTGTCGGT GGAAGCGGGC
GTGGACAACG TCACCGACCG CTACTACCTG GATCCGCTGG CGCTGGGCGT GATGCCGGCC
CCAGGTCGCA CCGCGCGGCT GGCATTGACC TGGAGGTACT GA
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| Protein sequence | MFDSHRPGRV LRPSRLCIAL LAVGLACAAP SSVLAQSAAS GHAALQRFDI PAQPLDEALR
SYMRQSGVQV VYPATLAQGV SSHAVSGNLS SDEALARLLQ GSGLAVRRVG TDAVTLESAT
PVQADSGVIV TDTLSVAGDR VDSGATSDEA RLLDGYRSVG STTTLNRTHL ERFRGTSNGD
IVKGVAGVTA GDPRVGNGFD VNIRGIQGQG RVPVIIDGGQ SSMDTYRGYA GQSQRTYLDP
DLISSLTITK GPSLQANASG GIGGVVEMET LKIGDVLREG RDFGVRVRGG LANNSANNLP
SYSAAPRNDR SATGSQFFNV AAAGHWDRFD LVAAYAYRDN GNYFSGKHGY DDFPQTRRTL
APLNPPRTEV FNTSARSKSA LLKGTWRIDD AQMLEAGYRR YEGTAGEIMA SQIIRVDRDR
IPQWDPGHVD MDSYTLRYRF NPDSELVDLR VNAAYTDTDS VMYNSLTGIT PWYFDRRTEW
YDAPSFSGDP GYKDAYRNPL RQKRFGLDAS NTSKFDTRAG AFTLDYGLSY SDEDIAPGSS
GPVMHDDLIN NRFLRNAERK EYSAVASLKW QPDEHWELLA GGRWNRVDVH DRNRLATPDA
YEVQGQYRYT ELLNGNPALP SWRAKRIALL NWYPDANGNF TQESLLASPY KKGTVGDIGG
WNFYDAGKAQ DLEVPVSWTW SQPIRRRDTA FSPTASVAYR FSEDTMVYVK YAEGTKLPSL
FETTLGLFTA AKPVGELKPE RARSWEIGAS TIRYDLFTAG DRLALKLAYF DTRIDDLITR
DYRTLSAGLI RNVDQFKVSG MEFQSSYDSG KVFADLSAHY YFKAKTCAPD IAAERRAYGA
QRRNDELANT PNCVDGGFEG SYTNTQNPPR YMVNLTLGSR LFDERLTFGT RVVHNAGPIS
KLDKDWNVGL SAIQQLYRPT TLVDLFASWS FNDQLSVEAG VDNVTDRYYL DPLALGVMPA
PGRTARLALT WRY
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