Gene Smal_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3310 
Symbol 
ID6476438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3711662 
End bp3712390 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID642732508 
ProducttonB-system energizer ExbB 
Protein accessionYP_002029692 
Protein GI194367082 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.885209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCTG CTGACCTGGC CCCCGTGGCT GCCCCTGCAC TGACGCCCTG GGGCATGTAT 
CTGGCCGCCG ACGTGGTGGT GAAGACCGTG ATGATCGCGC TCGCGCTGGC GTCGCTGGCC
ACCTGGACCG TGCTGCTGGC CAAGGGCTGG GAACTGGCCC GCCAGGCACG GCAGCTGCGC
GCAGCGCGTG CGCTGCTGCT GCAGGCGCCG AGCCTGCCCA GCGAAAGCGC CGACGCCAGT
GTGCAGCAGG GCACCGCACT CGCCATGCTG GACGCGGCGC GAACCGAGCT GCGCCTGTCT
CAGGAGCTGG ACAGCCGCGA TGGCACCAAG GAACGCGTTG CCTCGCGCCT GGGCCGTATC
GAACTGGAAA CTGCGCGCGT GCAGCGGCGC GGCATCGGCG TGCTGGCCAG CATCGGCGCG
GTGGCGCCGT TCGTTGGCCT GTTCGGCACG GTGTGGGGCA TCATGAACAG TTTCATCGGC
ATCGCCCACA GCAACACCAC CAACCTGGCG GTGGTCGCCC CCGGCATCGC CGAGGCCCTG
CTGGCGACCG CGCTGGGCCT GGTCGCAGCG ATTCCCGCAG TGCTGGTCTA CAACCATTTC
AGCCGCGTGC TGGCTGGCCT GTGTGGGCTG CTCGGCGATC TGTCGGCGGC CGTGCAGCAA
CTGGTCTCAC GCGATCTCGA TCGTGCCGTT CCGCGTACCG CAGCCGCGCC GCTGCGTGCG
GTGCACTGA
 
Protein sequence
MLPADLAPVA APALTPWGMY LAADVVVKTV MIALALASLA TWTVLLAKGW ELARQARQLR 
AARALLLQAP SLPSESADAS VQQGTALAML DAARTELRLS QELDSRDGTK ERVASRLGRI
ELETARVQRR GIGVLASIGA VAPFVGLFGT VWGIMNSFIG IAHSNTTNLA VVAPGIAEAL
LATALGLVAA IPAVLVYNHF SRVLAGLCGL LGDLSAAVQQ LVSRDLDRAV PRTAAAPLRA
VH