Gene Smal_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3272 
Symbol 
ID6476327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3676167 
End bp3676763 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content67% 
IMG OID642732470 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_002029654 
Protein GI194367044 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC TGGTACTGGC CAGCCACAAC GCTGGCAAGC TGGTGGAAAT GCAGGAGATC 
CTCGCCGATC TGCCGCTGCA GATCACCTCG GCCGCCGAGC TGGGCCTGGG CGACGTGGAA
GAGACCGGCC TGACCTTCGT CGAGAACGCG CTGCTGAAGG CGCGCGCGGC CTGCGAAGCG
ACCGGGCTGC CGGCGCTGGC CGATGACTCG GGCCTGATCG TCGATGCCCT CGGCGGTGCA
CCGGGCCTGT ACAGCGCGCG CTATGCCGGC CATCCGACCA ATGCTGCGGC CAACAACGCC
AAGCTGCTGG AGGCGATGGC CGATGTACCC GATGGCCAGC GCGACGCCCG CTTCTATGCG
GTGATCGTGC TGCTGCGCCA CGCCACCGAC CCGCAACCGC TGATCTGCGA AGGTCGCTGG
GAGGGGCAGA TCATCCGCGA ACTGCGTGGA ACGAATGGTT TCGGCTACAA CCCGGTGTTC
CTGGATACCA CCCACGGCCT GACCGCCGCG GAGATGGAGC CGGCACTGAA GAACGCCATC
AGCCACCGTG CCCTCGCCCT GCAACAGCTC AAGCAGCAGC TGGCGACGCT GTACTGA
 
Protein sequence
MKQLVLASHN AGKLVEMQEI LADLPLQITS AAELGLGDVE ETGLTFVENA LLKARAACEA 
TGLPALADDS GLIVDALGGA PGLYSARYAG HPTNAAANNA KLLEAMADVP DGQRDARFYA
VIVLLRHATD PQPLICEGRW EGQIIRELRG TNGFGYNPVF LDTTHGLTAA EMEPALKNAI
SHRALALQQL KQQLATLY