Gene Smal_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3239 
Symbol 
ID6476293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3631254 
End bp3632126 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID642732436 
ProductFimbrial assembly family protein 
Protein accessionYP_002029621 
Protein GI194367011 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA TCAATCTATT GCCCTGGCGC GCCGAGCGGC GCAAGCAACG CCAGCGTGAG 
TTCTACGCAA TGCTGGGCAT GGCCGCGATC GGTGGCCTGC TGCTGTCGCT GGTGATCTGG
TTCTACTACG ACCGCCAGGT GAGCGGCCAG ATGGACCGCA ACGCCTATCT GGAAGCCGAG
ATCGAGAAGG TCAAGGAACA GAACAAGGAG ATCGACCGCC TCGACGCCCA GAAGGAACGC
CTGCTGGCCC GCAAGAAGGT GATCGAGGAA CTGCAGGCCA AGCGCTCGCA GATGGTCCAC
CTGTTCGATG CGCTGGTGCG CACCATTCCT GACGGCGTGG TACTGACCGC GCTGAAGCAG
GAAGGCGATG TACTGACCCT GGAAGGCCGT ACCCAGTCCA ATGCCCGTGT TTCGGCCTAC
ATGCGCAACC TGGATACCTC CGGCTGGATG ACCAACCCGG AGCTGTCGAT CATCGAGGCG
CGTGATCCGG AGAAGGACAA GGACGGCAAG GCGGGTCCGG TTGCGGACAT GAAGGCGCTG
CCGTACGTGT TCGTGGTCAA GGTGAAGCTG CCGGCACAGA GTGAAGAGGT GGCGGCGACG
CCGGGCCTGA ACGCAGACGG CACGGTTGCG CCGGCAGCGC CGGCACCCGT GGCTCCGCTT
GCCGCGGGTC CGGATGCTGC CACGCCGGCG GCACCGGCCG CAGGCCAGCC AGCGGCGGCT
CCGGCGGCTC CGGCGGCACC TGCAGCAGTA CCGGCCAATC CACCGGCCGC GCCGAACCAG
CCGGCTGCCA AGCCCGCCCC GAAGCCTGAG GGCAGCCGCC TGGCGCAGCC GCCGCAGGCC
TTCCATGCCC CGCTGCAGGG GGACCGCGCA TGA
 
Protein sequence
MARINLLPWR AERRKQRQRE FYAMLGMAAI GGLLLSLVIW FYYDRQVSGQ MDRNAYLEAE 
IEKVKEQNKE IDRLDAQKER LLARKKVIEE LQAKRSQMVH LFDALVRTIP DGVVLTALKQ
EGDVLTLEGR TQSNARVSAY MRNLDTSGWM TNPELSIIEA RDPEKDKDGK AGPVADMKAL
PYVFVVKVKL PAQSEEVAAT PGLNADGTVA PAAPAPVAPL AAGPDAATPA APAAGQPAAA
PAAPAAPAAV PANPPAAPNQ PAAKPAPKPE GSRLAQPPQA FHAPLQGDRA