Gene Smal_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3237 
Symbol 
ID6476291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3630071 
End bp3630604 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content67% 
IMG OID642732434 
ProductPilus assembly protein PilP 
Protein accessionYP_002029619 
Protein GI194367009 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3168] Tfp pilus assembly protein PilP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.947409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGTT CCTTCTTCGC ACGTTGTGGA ATGGCTGCTG CAGTGCTGTT GCTGGCTGCG 
TGCGGCCGTG GCGTGACCAG CACGCCCGGC GATGCACCGA ACCTGGAAAA GTGGGTGGAG
GGTGAGCGTG CACGACCGGC GCAGCCACTG GAGCCGCTGC CGGTGATGCA GCAGTTCGAG
ACCTTCGAAT ACTCCGCGCA GGGCATGCGT GATCCGTTCA CCGATGCCTG GACCAATCCG
CAGGGGAGCG GTGGGTTGCG GCCGGATCCG AACCGGCGCA AGGAGCCGCT GGAAGGCTTC
CCGCTGGACG CACTGGACAT GGTCGGCACC ATCGGCACCG GCGCAGGCAC TGTCGCGCTG
GTGATGGGAC CGGACAAGGT GACCTACCGG GTGCGCCCGG GCGGTTACCT GGGGCAGAGC
GACGGACGGG CCACGGCGGT CTTCGAGGAC CGCGTGGAGC TGATCGAACT GGTGCCGGAT
GGCGCGGGTG GCTGGCTGGA ACGGCCGGCA ACGCTCTCGC TTGAAGATCA ATGA
 
Protein sequence
MIRSFFARCG MAAAVLLLAA CGRGVTSTPG DAPNLEKWVE GERARPAQPL EPLPVMQQFE 
TFEYSAQGMR DPFTDAWTNP QGSGGLRPDP NRRKEPLEGF PLDALDMVGT IGTGAGTVAL
VMGPDKVTYR VRPGGYLGQS DGRATAVFED RVELIELVPD GAGGWLERPA TLSLEDQ