| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3236 |
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| Symbol | |
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| ID | 6476290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3628076 |
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| End bp | 3630049 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642732433 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_002029618 |
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| Protein GI | 194367008 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0831475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTTC ACCAAGCCAA GGGGCTGCGT CCCGTCCGGC GCTCTACCTT GAACCGTGTC
AGCGCGCTGG GAGTCGCGCT GATGCTGGCC TGCGCTCCGG CGCTGGCTGC CGCACCGGCG
GAAAAGCCGG TGGGCACCAC CGTGGCAGCG GCTGCAGCAC CGGCCGGCCT GTCGGTGGCC
AAGATCGATT TCAAGCGGGG CGATGATGGC GCCGGGCGCC TGATCGTCCA GTTCGACGGC
CAGGGCGCGA TCCCGGACCT GCGTACGCAG GGCAACAGCG TGGTCGTGGA CGTCGGCAAT
GCCCGTCTGC CGGCCAACCT GCAGAAGCCG ATGAATGTCG TCGACTTCGC CACGCCGGTG
CAGCGCATCG ACGCCAAGCC GTCCGGTGCC GGTACCCAGC TGGTGCTGAG CACCGGCGGT
GCGGTCGAAT CGCTCGCCTA CCAGAGCGGC AACGAGTACG TGGTCGAGAT CAGCCCGCGG
CAGGCCCCGG CCGCTGTAGG CGCGGTCACC GCCGGCAGCG TCACCCAGGC AGCCAAGGCG
TTGCCGCAGC GCGGCTTCAC CGGCAAGCCG GTGACCTTCA ACTTCCAGGA CGTGCCGGTG
CGCACCGTGC TGCAGTTGAT TGCCGAAGAG TCCAATCTCA ACGTGGTGGC ATCCGACTCG
GTGCAGGGCA ACGTGACCCT GCGCCTGGTG AATGTGCCGT GGGACCAGGC GCTGGACATC
GTGCTGCGCG CCAAGGGCCT GGACAAGCGT CGCGACGGCA GCGTGATCTG GGTCGCTCCG
CAGGCCGAAC TGGCCAAGTT CGAGCAGGAG AAGGAAGACG CGCGCATCGC CATCGAGAAC
CGCGAGGACC TGGTCACCGA TTACGTCCAG ATCAACTACC ACAGCGCCAC CCAGATCTTC
AAAGCACTGA CTGAAGCCAA GGGCATCGGT GGCGGTGGCG GTGGTGGCGC TGGCGGCGGC
GGTGGTGGCT CATCCTCGCA GGAGGACAGT GGCTTCCTGT CCGGTCGCGG CCGCATCGTG
GCCGACGAGC GCACCAACAC GCTGATGATC AGCGACATTC CGAAGAAGAT CGCGCGCATG
CGCGAGCTGA TCAACGTGAT CGACCGCCCG GTCGACCAGG TGCTGATCGA AAGCCGTATC
GTCATTGCGA CCGACACCTT CGCCCGCGAG CTGGGTGCGA AGTTCGGCAT CAGTGGCAGC
CGTGACAACG TCTACTTCAG TGGCAATCTG GAAGCCAATC GCCTGACCCG CGAATCGCAG
GTCAAGACGG CGCAGGACAA TGCCAAGGCC GAGCGTGACT GGATTGCCGG CGGCCGCGTC
GGTCCGCCGC CGGTGGCGAC GGGCTCGACC ATCACCCGCG GCCTGAACTG GAGCCTGCCG
GTTGCTACGG CCAGCAATCC GGGTTCGCTG GCCCTGTCGA TCCTCAACGC CGGCTACCTG
CTGGATGTGG AGCTTTCGGC CATGCAGGAA GAGTCGCGTG GCGAAGTGAT CTCCAACCCG
CGTGTGGTCA CCACCAACCA GCGCGAGGCA ACGATCAAGC AGGGCAAGGA AATCGGCTAT
GTCACCATCA GTGGTGGCGG CACCGGTGGC GTTGCAACGC CGAACGTGCA GTTCAAGGAA
GTGGTGCTGG AACTGAAGGT CACGCCGACC ATCACCAACG ACAACCGCGT GTTCCTCAAC
ATGCAGGTGA AGAAGGACGA AGTGGACCAG CTCATCCAGC TGGACGGTTA CGGCACCGTG
CCGTCGATCA ACCGCCGCGA AGTCAACACC GCGGTGCTGG TCGAGGACGG CCAGACCGTG
GTCATCGGTG GCGTGTACGA GTTCACCGAC CGCAGCAGCA TCAGCAAGGT GCCGTTCCTG
GGCGACGTGC CGTTCCTCGG CAACCTGTTC AAGAAGCGTG GCCGCAACAA GGACAAGGCC
GAACTGCTGG TGTTCGTGAC CCCGAAGGTG CTGCGCGTGG CCAAGCAGAA CTGA
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| Protein sequence | MTFHQAKGLR PVRRSTLNRV SALGVALMLA CAPALAAAPA EKPVGTTVAA AAAPAGLSVA
KIDFKRGDDG AGRLIVQFDG QGAIPDLRTQ GNSVVVDVGN ARLPANLQKP MNVVDFATPV
QRIDAKPSGA GTQLVLSTGG AVESLAYQSG NEYVVEISPR QAPAAVGAVT AGSVTQAAKA
LPQRGFTGKP VTFNFQDVPV RTVLQLIAEE SNLNVVASDS VQGNVTLRLV NVPWDQALDI
VLRAKGLDKR RDGSVIWVAP QAELAKFEQE KEDARIAIEN REDLVTDYVQ INYHSATQIF
KALTEAKGIG GGGGGGAGGG GGGSSSQEDS GFLSGRGRIV ADERTNTLMI SDIPKKIARM
RELINVIDRP VDQVLIESRI VIATDTFARE LGAKFGISGS RDNVYFSGNL EANRLTRESQ
VKTAQDNAKA ERDWIAGGRV GPPPVATGST ITRGLNWSLP VATASNPGSL ALSILNAGYL
LDVELSAMQE ESRGEVISNP RVVTTNQREA TIKQGKEIGY VTISGGGTGG VATPNVQFKE
VVLELKVTPT ITNDNRVFLN MQVKKDEVDQ LIQLDGYGTV PSINRREVNT AVLVEDGQTV
VIGGVYEFTD RSSISKVPFL GDVPFLGNLF KKRGRNKDKA ELLVFVTPKV LRVAKQN
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