Gene Smal_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3229 
Symbol 
ID6476283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3619551 
End bp3620870 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content65% 
IMG OID642732426 
Productsodium:dicarboxylate symporter 
Protein accessionYP_002029611 
Protein GI194367001 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAG CTGCTGCCGA CAAGAAGAAG TTGCCCCTGC ATTGGAAGAT GGGCATCGGC 
TTCGCGATCG GCCTGGTCCT GGGACTGATC GTGCACGCCC TGGGTGGCAG CGTCGATGGT
CTGCAGGCCG GTGCCAAGTG GGTAATGGAC TACATCACCA CCCCGGCTTC GGGCCTGTTC
CTCAACCTGA TCTTCATGCT GATCGTGCCG CTGATCTTCT CGGCGCTGAT CATGGGCGTG
TCGGAGATGG GCGATATCCG CGCCCTCGGT CGCATCGGCT GGAAGACCCT GGCCTATACC
GTGCTGCTGT CCGGCATCGC CGTCGGCATC GGCCTGGTGC TGGTCAATCT GCTCAAGCCG
GGCGTGGGCG TCGACCCGCA GGTCGCGGCG ATGATGCTGT CGGAGAACGC CGAGCGCAGC
AAGGAGATCG TTGCTGGCAT CCATGGCACG CCGAAGGGCA TGGACATGCT GCTGTCGATC
GTGCCGAGCA ACGTGCTGCA GGCCGCGTCT GACAACGGCG CGATCCTGTC GCTGATGTTC
TTCGCGCTGA TGTTCGGCAT CGGCATGGTG CTGACCGACA ACGAGAAGGT CGCCCCGCTG
CGCCGCGCCA TCGAAGGCGT GTTCGAAATC TCGATGACCC TGATCAACCT GGTCATCCGC
CTGGCGCCGT ACGCGGTGGC CTGCTTCATG TTCAACCTGG CCGCACTGTT CGGCTTCGAG
CTGATCATCC GCCTGGGCGC CTACGTGGGC GTGGTGGTGC TGGCACTGGG CCTGCACATG
GTGGTGACCT ACGGTACGGC CGTGTGGCTG TCCGGCCGTT CGCCGCTGTC GTTCTTCCGC
GATACCCAGG AGGCGACAGT GATGGCGTTC TCCACCGCGT CCAGTAATGC CACCCTGCCG
ACCGCGCTGC GCGTGGCCGA CCAGATGGGC CTGCCGCAGC GGGTTTCGCG CTTCGTGCTG
ACCGTGGGTG CCACCGCCAA CCAGAACGGC ACCGCGTTGT TCGAGGGCGT GACGGTGATC
TTCCTGGCCC AGTTCTTCGG CGTGGATCTG AGCATCGGCC AGCAGATCAT GGTGATGGCG
GTCTGCATCC TCGGTGGCAT CGGTACCGCC GGCGTACCGT CCGGCTCGCT GCCGGTGGTG
GCGATGATCT GCGCGATGGT GGGCGTGAAC CCGCTGGGCA TCGGCCTGAT CCTGGGCGTG
AACCACTTCC TGGACATGTG CCGTACCGCG CTGAACGTCA CCGGTGACCT GGCCCTGACC
ACCCTGGTGG CCAAGGGTGA GGGCCACGAC GGCCCGGCGC TGACCCCGCA CAAGGACTGA
 
Protein sequence
MTAAAADKKK LPLHWKMGIG FAIGLVLGLI VHALGGSVDG LQAGAKWVMD YITTPASGLF 
LNLIFMLIVP LIFSALIMGV SEMGDIRALG RIGWKTLAYT VLLSGIAVGI GLVLVNLLKP
GVGVDPQVAA MMLSENAERS KEIVAGIHGT PKGMDMLLSI VPSNVLQAAS DNGAILSLMF
FALMFGIGMV LTDNEKVAPL RRAIEGVFEI SMTLINLVIR LAPYAVACFM FNLAALFGFE
LIIRLGAYVG VVVLALGLHM VVTYGTAVWL SGRSPLSFFR DTQEATVMAF STASSNATLP
TALRVADQMG LPQRVSRFVL TVGATANQNG TALFEGVTVI FLAQFFGVDL SIGQQIMVMA
VCILGGIGTA GVPSGSLPVV AMICAMVGVN PLGIGLILGV NHFLDMCRTA LNVTGDLALT
TLVAKGEGHD GPALTPHKD