Gene Smal_3219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3219 
Symbol 
ID6476273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand- 
Start bp3608178 
End bp3609182 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID642732416 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002029601 
Protein GI194366991 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.072376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.223747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA AGGTTGGTAT CAACGGTTTC GGTCGCATCG GGCGTAACGT CCTGCGCTCG 
GCGGTGCTGA ACTTCGGCGA CGACATCGAA ATCGTGGCCA TCAACGATCT GCTGGAGCCG 
GATTACCTGG CCTACATGCT CAAGTACGAC TCCGTGCACG GCCGCTTCAA GGCCGATGTG 
GCGGTGCAGG GCAACGACCT GCTGGTCAAC GGCAAGAAGA TCCGCCTGAC CCAGGAACGC 
GACCCGGCCA ACCTGAAGTG GAACGACGTG GACGTGGACG TGGTGATCGA GTCCACCGGC 
CTGTTCCTGA CCAAGGAAAC CGCGCAGAAG CACATCGACG CGGGCGCGAA GAAGGTGATC 
ATGTCGGCGC CGTCGAAGGA CGACACCCCG ATGTTCGTCT ACGGTGTGAA CGACAAGACC 
TACGCCGGCC AGGCGATCGT CTCCAACGCC TCGTGCACCA CCAACTGCCT GGCGCCGCTG 
GCCAAGGTCA TCAATGACAA GTGGGGCATC AAGCGCGGCC TGATGACCAC CGTGCATGCG 
GCCACCGCCA CCCAGAAGAC CGTCGATGGC CCGTCCAACA AGGACTGGCG CGGCGGCCGC 
GGCATCCTGG AGAACATCAT TCCGTCGTCC ACCGGTGCGG CCAAGGCCGT CGGCGTGGTC 
ATCCCGGAAC TGAACAAGAA GCTGACCGGC ATGAGCTTCC GCGTCCCGAC CTCGGACGTG 
TCGGTGGTCG ATCTGACCGT CGAGCTGGAA AAGGAAGCCA CCTACGCCGA GATCTGCGCT 
GAAGTGAAGG CACAGAGCGA AGGCCCGCTG AAGGGCATCC TGGGCTACAC CGAAGACAAG 
GTCGTGGCCA CCGATTTCCG CGGCGAAACC TGCACCTCGG TGTTCGACGC CGAAGCCGGT 
ATCGCCCTGG ACAGCACCTT CGTCAAGCTG GTGACCTGGT ACGACAACGA GTGGGGCTAC 
TCGAACAAGT GCCTGGAAAT GGCCAAGGTC GTCGCCGCCA AGTAA
 
Protein sequence
MAIKVGINGF GRIGRNVLRS AVLNFGDDIE IVAINDLLEP DYLAYMLKYD SVHGRFKADV 
AVQGNDLLVN GKKIRLTQER DPANLKWNDV DVDVVIESTG LFLTKETAQK HIDAGAKKVI 
MSAPSKDDTP MFVYGVNDKT YAGQAIVSNA SCTTNCLAPL AKVINDKWGI KRGLMTTVHA 
ATATQKTVDG PSNKDWRGGR GILENIIPSS TGAAKAVGVV IPELNKKLTG MSFRVPTSDV 
SVVDLTVELE KEATYAEICA EVKAQSEGPL KGILGYTEDK VVATDFRGET CTSVFDAEAG 
IALDSTFVKL VTWYDNEWGY SNKCLEMAKV VAAK