Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3175 |
Symbol | |
ID | 6476146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3558363 |
End bp | 3558767 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642732371 |
Product | Fimbrial protein pilin |
Protein accession | YP_002029557 |
Protein GI | 194366947 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGGA AGCGTGGTTT TACGTTGATT GAAATGATGA TAGTTGTCGC GACTATCGCG GTGCTTGCGG CCATTGCCGT GCCGATGTAC CAGATGTACG TGGCCAGATC GCAGCTGACG GCGGGTCTGG CTGAGGTAAG TGGTGGGCGC ACGATGTTCG AGTCGCAGAT TCTCGCCAAC AACATTACCA CCTTCCAGCT TGCAGATATT GGTCTGCAGT CCAGTACTGC GCGATGCGTG ATGAGCATGG AATCGTCGGA AACCGGAAGT ATCCAGTGTC GCCTTAAGGG CAATCCGTTA GTCAACGGAA AGACGGTGCA GATTGCACGT AATATGTCCG GCAATTGGCA GTGCAAAGTT GATGCGAACA TCCCTGCTTA TCTCTGGCCT CGTGACTGCA ACTGA
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Protein sequence | MRGKRGFTLI EMMIVVATIA VLAAIAVPMY QMYVARSQLT AGLAEVSGGR TMFESQILAN NITTFQLADI GLQSSTARCV MSMESSETGS IQCRLKGNPL VNGKTVQIAR NMSGNWQCKV DANIPAYLWP RDCN
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