| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3166 |
|---|
| Symbol | |
|---|
| ID | 6476137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 3546289 |
|---|
| End bp | 3547662 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642732362 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002029548 |
|---|
| Protein GI | 194366938 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.521221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA CCCGCAGCGC CCTCGTCGTC GACGATGAAC GCGACATCCG CGAACTGCTG
GTACTGACCC TCGGCCGCAT GGGGCTGCGT ATCAGTACCG CCGCCAACCT GGCCGAAGCG
CGCGAGCTGC TGGCCAGCAA TCCGTACGAC CTGTGCATCA CCGACATGCG GCTGCCCGAT
GGCAACGGCA TCGAGCTGGT CAGCGAGATC GCCCAGCACT ACCCGCGCAC GCCGGTGGCG
ATGATCACCG CCTTCGGCAG CATGGACCTG GCCGTGGAAG CACTGAAGGC CGGTGCCTTC
GACTTCGTCA GCAAGCCGGT GGATATCGCC GTCCTGCGTG GACTGGTCAA GCATGCACTG
GAACTCAACA ACGCCGAACG CCCGCAGCCC GGGCCCAACG CCGAACAGGG CGCACGCCTG
CTGGGCGCTT CGCCGGCCAT GGACGTGCTG CGCACCACCA TCGGCAAGGT CGCGCGCAGC
CAGGCGCCGG TCTACATCCT GGGTGAGTCC GGCGTTGGCA AGGAACTGGT CGCACGCACC
ATCCACGCCC AGGGCGCGCG CGCGGCCGGA CCGTTCATTC CGGTCAACTG CGGCGCCATT
CCCGGCGAGC TGATGGAAAG CGAGTTCTTC GGCCATCGCA AGGGCAGCTT CAGCGGCGCC
CATGCCGACA AGCCCGGCCT GTTCCAGGCC GCACACGGCG GCACCCTGTT CCTGGACGAA
GTGGCCGAGC TGCCGCTGCA GATGCAGGTG AAACTGCTGC GCGCGATCCA GGAGAAGTCG
GTGCGGCCGG TCGGTGCAGC CAACGAAGAA CCGGTGGACG TGCGCATCCT CTCTGCCACC
CACCGCGATC TGGCCGAACT GGTCGAGGAC GGGCGTTTCC GCCACGACCT CTACTACCGC
ATCAACGTGA TCGAACTGAG GGTGCCGCCG CTGCGCGAGC GCCGCCAGGA CCTGCCGGAG
CTGGCCGCGG CAGTGCTGGC ACGACTGGCC CGCAGCCACG GCCGCGCCAC CCCGCTGCTG
GCGCCGTCGG CGCTGGAGGC ACTGGCCCAG TACGCCTTCC CCGGCAACGT GCGCGAACTG
GAGAACATCC TGGAACGGGC GCTGGCGCTG GCCGAGGAAG ACTGCATCGG TGCAGACGAC
CTGCGCCTGC CGCAGCATGC TCCGCGCGTC CCCGGCGGTG CCGCTCCTGT CGAAGCCGTG
GCCGACCTGC AGCCTGGCAG CGCTGCCCTG CCCTCGTACA TCGAGCAGCT CGAGCGCAGC
GCCATCCAGC GCGCGCTGGA AGAGAACCGC TGGAACAAGA CCCGCACCGC CGCACAGCTG
GGCATCACCT TCCGTGCGCT GCGCTACAAG CTGAAGAAGC TGGGGATGGA GTAA
|
|---|
| Protein sequence | MNETRSALVV DDERDIRELL VLTLGRMGLR ISTAANLAEA RELLASNPYD LCITDMRLPD
GNGIELVSEI AQHYPRTPVA MITAFGSMDL AVEALKAGAF DFVSKPVDIA VLRGLVKHAL
ELNNAERPQP GPNAEQGARL LGASPAMDVL RTTIGKVARS QAPVYILGES GVGKELVART
IHAQGARAAG PFIPVNCGAI PGELMESEFF GHRKGSFSGA HADKPGLFQA AHGGTLFLDE
VAELPLQMQV KLLRAIQEKS VRPVGAANEE PVDVRILSAT HRDLAELVED GRFRHDLYYR
INVIELRVPP LRERRQDLPE LAAAVLARLA RSHGRATPLL APSALEALAQ YAFPGNVREL
ENILERALAL AEEDCIGADD LRLPQHAPRV PGGAAPVEAV ADLQPGSAAL PSYIEQLERS
AIQRALEENR WNKTRTAAQL GITFRALRYK LKKLGME
|
|---|
| |