Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3138 |
Symbol | |
ID | 6476109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3506321 |
End bp | 3508186 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642732334 |
Product | ABC transporter related |
Protein accession | YP_002029520 |
Protein GI | 194366910 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00577211 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCCC TTCGTAATTT CGCCTTGCGC CGCGGCGAGC GGCTGCTGTT GTCCAATGTC GACCTGACCC TGCATGCCGG TTACCGGGTG GGTGTGGTCG GCCGCAACGG TGCCGGCAAG TCCAGCCTGT TCGCGGCAGT GAAGGGTGAG CTGGAGGCGG ACAAGGGCGA CGTCGACCTG CCCGGCAAGG TGCGCATCGC CAGCGTTGCC CAGGAAACCC CGTCGCTGCC GGACCCGGCG CTGAGCTTCG TGCTGGGCGG TGATACCGAA GTGGCCGCCG TGCTGGCCGC CGAGGCCGAG GCCACCGCCC GCGAAGACTG GGAAGCGGTG GCCGAGGCGC ACACGAAGAT GGCCGAGCTC AATGCCTACG ACGCCGAAGC GCGCGCCGGC AAGCTGCTGC ACGGCCTCGG TTTCCCGGCA GAGACCCACC ACCGCGCGGT GTCCTCGTTC TCCGGCGGCT GGCGCGTGCG CCTGAATCTG GCCCGCGCGC TGATGATGCC CAGCGACCTG CTGCTGCTGG ACGAACCGAC CAACCACCTG GATCTGGACG CGGTGTACTG GCTGGAGCAG TGGCTGCTGA AGTATCCGGG CACGCTGCTG CTGATCTCGC ATGACCGCGA GTTCCTCGAC AACGTGGCCA CCCACACCCT GCACCTGCAC GGTGGCGGCG CCAAGCTCTA CCCGGGCGGC TACACCGATT TCGAGCGCCA GCGCGCCGAA CAGCTGCGCC AGCAGCAGAT CGCGCACGAG AAGGAACAGG CCGAGCGCGC CCACCTGCAG AGCTTCATCG ACCGCTTCAA GGCGCAGGCC AGCAAGGCCG CGCAGGCGCA GAGCCGCATG AAGCGCCTGG CCAAGCTGGC CGGCACCGAA GCGGTGCGCG CCGAGCGCGA GTTCCGCATC GAGTTTGCGC CGCCGGCCAA GCTGCCGTTC TCGCTGATCC GCCTGAACCA CGTCGAGGCC GGCTACGGCA AGGACGCGGT GATCCTGCAC AACGTCGGCT TCGGCCTGGA AGCGGGCCAG CGTATCGGCC TGCTCGGCCC CAACGGTGCC GGTAAGACCA CCCTGGTGAA GACCCTGGTG GGTGAACTGG CACCGATCGT CGGCGAGCGC ATGGCGCACC CGGACCTGAA GATCGGCTAC TTCGCCCAGC ACACGGTGGA GTCGCTGCAC GAAGGCCAGT CGCCGATGGA GCATTTCCGC GAGATCGCCC CGGACGCACC GAACCAGTCG TTCCGCGATT TCCTCGGCAA GTGGAACTTC CCGGGCGACC GCGCGTTCGA GCCGGTCGAT GGCTTCTCCG GCGGCGAGCG CGCGCGCCTG GCGCTGGCGC TGATCGCCTG GCAGCAGCCG AACGTGCTGC TGCTGGACGA ACCGACCAAC CACCTTGACC TGGAAATGCG CGAAGCACTG GCTGAGGCAC TGGCCGATTT CGACGGCGCG ATCGTGATGG TGTCGCATGA CCGCCATCTG ATCGGCCTGG TCTGTGACAC CTTCTGGCGC GTGGCCGATG GCGTGGTCGA ACCGTTCGAC GGCGACCTCG ACGCCTACGC CGCCTGGCTG CGGACCCGTC CGCAGGCGCA AGGCACCAAG GCGCGCATGG AACAGGTGGA AGAGCCGGTG GTGGTCAAGA CTGCGCCGGT GGCGCAGGTG GTGCAGAAGA AGCCGGTGAA TCCGCACAAG CTGGCCGCGG CCGAATCCAA GGTGGCCGAG CTGGAAGGCG CCCTGGCCGA GCTGGACCGG CAGCTGGCCG ACCCGGCCAA CTACGCCGAT GCCACCCGCA TGGCGGTGAT CGGCCGCGAC CGCGAAACCA CCGCCGCGCA GCTGGAAAAA GCTGAGGCAG CGTGGATGGA ACTGCTGGAG TCCTGA
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Protein sequence | MISLRNFALR RGERLLLSNV DLTLHAGYRV GVVGRNGAGK SSLFAAVKGE LEADKGDVDL PGKVRIASVA QETPSLPDPA LSFVLGGDTE VAAVLAAEAE ATAREDWEAV AEAHTKMAEL NAYDAEARAG KLLHGLGFPA ETHHRAVSSF SGGWRVRLNL ARALMMPSDL LLLDEPTNHL DLDAVYWLEQ WLLKYPGTLL LISHDREFLD NVATHTLHLH GGGAKLYPGG YTDFERQRAE QLRQQQIAHE KEQAERAHLQ SFIDRFKAQA SKAAQAQSRM KRLAKLAGTE AVRAEREFRI EFAPPAKLPF SLIRLNHVEA GYGKDAVILH NVGFGLEAGQ RIGLLGPNGA GKTTLVKTLV GELAPIVGER MAHPDLKIGY FAQHTVESLH EGQSPMEHFR EIAPDAPNQS FRDFLGKWNF PGDRAFEPVD GFSGGERARL ALALIAWQQP NVLLLDEPTN HLDLEMREAL AEALADFDGA IVMVSHDRHL IGLVCDTFWR VADGVVEPFD GDLDAYAAWL RTRPQAQGTK ARMEQVEEPV VVKTAPVAQV VQKKPVNPHK LAAAESKVAE LEGALAELDR QLADPANYAD ATRMAVIGRD RETTAAQLEK AEAAWMELLE S
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