Gene Smal_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3138 
Symbol 
ID6476109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3506321 
End bp3508186 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content68% 
IMG OID642732334 
ProductABC transporter related 
Protein accessionYP_002029520 
Protein GI194366910 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00577211 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCC TTCGTAATTT CGCCTTGCGC CGCGGCGAGC GGCTGCTGTT GTCCAATGTC 
GACCTGACCC TGCATGCCGG TTACCGGGTG GGTGTGGTCG GCCGCAACGG TGCCGGCAAG
TCCAGCCTGT TCGCGGCAGT GAAGGGTGAG CTGGAGGCGG ACAAGGGCGA CGTCGACCTG
CCCGGCAAGG TGCGCATCGC CAGCGTTGCC CAGGAAACCC CGTCGCTGCC GGACCCGGCG
CTGAGCTTCG TGCTGGGCGG TGATACCGAA GTGGCCGCCG TGCTGGCCGC CGAGGCCGAG
GCCACCGCCC GCGAAGACTG GGAAGCGGTG GCCGAGGCGC ACACGAAGAT GGCCGAGCTC
AATGCCTACG ACGCCGAAGC GCGCGCCGGC AAGCTGCTGC ACGGCCTCGG TTTCCCGGCA
GAGACCCACC ACCGCGCGGT GTCCTCGTTC TCCGGCGGCT GGCGCGTGCG CCTGAATCTG
GCCCGCGCGC TGATGATGCC CAGCGACCTG CTGCTGCTGG ACGAACCGAC CAACCACCTG
GATCTGGACG CGGTGTACTG GCTGGAGCAG TGGCTGCTGA AGTATCCGGG CACGCTGCTG
CTGATCTCGC ATGACCGCGA GTTCCTCGAC AACGTGGCCA CCCACACCCT GCACCTGCAC
GGTGGCGGCG CCAAGCTCTA CCCGGGCGGC TACACCGATT TCGAGCGCCA GCGCGCCGAA
CAGCTGCGCC AGCAGCAGAT CGCGCACGAG AAGGAACAGG CCGAGCGCGC CCACCTGCAG
AGCTTCATCG ACCGCTTCAA GGCGCAGGCC AGCAAGGCCG CGCAGGCGCA GAGCCGCATG
AAGCGCCTGG CCAAGCTGGC CGGCACCGAA GCGGTGCGCG CCGAGCGCGA GTTCCGCATC
GAGTTTGCGC CGCCGGCCAA GCTGCCGTTC TCGCTGATCC GCCTGAACCA CGTCGAGGCC
GGCTACGGCA AGGACGCGGT GATCCTGCAC AACGTCGGCT TCGGCCTGGA AGCGGGCCAG
CGTATCGGCC TGCTCGGCCC CAACGGTGCC GGTAAGACCA CCCTGGTGAA GACCCTGGTG
GGTGAACTGG CACCGATCGT CGGCGAGCGC ATGGCGCACC CGGACCTGAA GATCGGCTAC
TTCGCCCAGC ACACGGTGGA GTCGCTGCAC GAAGGCCAGT CGCCGATGGA GCATTTCCGC
GAGATCGCCC CGGACGCACC GAACCAGTCG TTCCGCGATT TCCTCGGCAA GTGGAACTTC
CCGGGCGACC GCGCGTTCGA GCCGGTCGAT GGCTTCTCCG GCGGCGAGCG CGCGCGCCTG
GCGCTGGCGC TGATCGCCTG GCAGCAGCCG AACGTGCTGC TGCTGGACGA ACCGACCAAC
CACCTTGACC TGGAAATGCG CGAAGCACTG GCTGAGGCAC TGGCCGATTT CGACGGCGCG
ATCGTGATGG TGTCGCATGA CCGCCATCTG ATCGGCCTGG TCTGTGACAC CTTCTGGCGC
GTGGCCGATG GCGTGGTCGA ACCGTTCGAC GGCGACCTCG ACGCCTACGC CGCCTGGCTG
CGGACCCGTC CGCAGGCGCA AGGCACCAAG GCGCGCATGG AACAGGTGGA AGAGCCGGTG
GTGGTCAAGA CTGCGCCGGT GGCGCAGGTG GTGCAGAAGA AGCCGGTGAA TCCGCACAAG
CTGGCCGCGG CCGAATCCAA GGTGGCCGAG CTGGAAGGCG CCCTGGCCGA GCTGGACCGG
CAGCTGGCCG ACCCGGCCAA CTACGCCGAT GCCACCCGCA TGGCGGTGAT CGGCCGCGAC
CGCGAAACCA CCGCCGCGCA GCTGGAAAAA GCTGAGGCAG CGTGGATGGA ACTGCTGGAG
TCCTGA
 
Protein sequence
MISLRNFALR RGERLLLSNV DLTLHAGYRV GVVGRNGAGK SSLFAAVKGE LEADKGDVDL 
PGKVRIASVA QETPSLPDPA LSFVLGGDTE VAAVLAAEAE ATAREDWEAV AEAHTKMAEL
NAYDAEARAG KLLHGLGFPA ETHHRAVSSF SGGWRVRLNL ARALMMPSDL LLLDEPTNHL
DLDAVYWLEQ WLLKYPGTLL LISHDREFLD NVATHTLHLH GGGAKLYPGG YTDFERQRAE
QLRQQQIAHE KEQAERAHLQ SFIDRFKAQA SKAAQAQSRM KRLAKLAGTE AVRAEREFRI
EFAPPAKLPF SLIRLNHVEA GYGKDAVILH NVGFGLEAGQ RIGLLGPNGA GKTTLVKTLV
GELAPIVGER MAHPDLKIGY FAQHTVESLH EGQSPMEHFR EIAPDAPNQS FRDFLGKWNF
PGDRAFEPVD GFSGGERARL ALALIAWQQP NVLLLDEPTN HLDLEMREAL AEALADFDGA
IVMVSHDRHL IGLVCDTFWR VADGVVEPFD GDLDAYAAWL RTRPQAQGTK ARMEQVEEPV
VVKTAPVAQV VQKKPVNPHK LAAAESKVAE LEGALAELDR QLADPANYAD ATRMAVIGRD
RETTAAQLEK AEAAWMELLE S