| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3125 |
|---|
| Symbol | |
|---|
| ID | 6476025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3493785 |
|---|
| End bp | 3495704 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642732321 |
|---|
| Product | K potassium transporter |
|---|
| Protein accession | YP_002029507 |
|---|
| Protein GI | 194366897 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3158] K+ transporter |
|---|
| TIGRFAM ID | [TIGR00794] potassium uptake protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCA GTCAAACCCC GCACGCAGCC GCCCCCGGCG GCCACGGTCA CGCCCCTCCA
GCCGGAGGCC TGGCGCTGAT CATCGGTGCG ATCGGCGTGG TCTTCGGCGA TATCGGCACC
AGCCCGCTGT ACACCCTGAA GGAGGCGTTC TCGCCGCACT ACGGGCTCAA CAGCGACCAT
GACACCGTGC TGGGCGTGCT GTCGCTGGCG TTCTGGGCGT TGAACATCGT GGTCACCCTG
AAGTACGTGA CCATCATCAT GCGCGCCGAC AATGACGGCG AAGGCGGCAT CATGGCGCTG
ATGGCGCTGA CCCAGCGCAC GCTGCGCAAT GGGTCGCGTT CGGCCTATGT GGTCGGCATC
CTTGGCATTT TCGGTGCCTC GCTGTTCTTC GGCGATGGCG TGATCACGCC GGCGATATCG
GTGCTGGGTG CGGTCGAAGG CTTGGAGGTC GCTGCGCCGG GGCTGCATGC CTTCATCGTG
CCGATCACCG TGGTGGTGCT GCTGGCCGTG TTCGCGGTAC AGCGCTTCGG TACGGCGAAG
ATCGGCAAGC TGTTCGGGCC GATCACCTCG ATCTGGTTCA TTTCGCTGGC GGCGATCGGC
ATCTACAACA TCGTCGACGC GCCGGAAGTG CTGAAGGCGT TCAACCCGTG GTGGGCAATC
CGTTTCTTCA TGGAACATGG CTGGCACAGC ATCTTCATCC TGGGCGCGGT GGTGCTGGCA
GTGACCGGTG GCGAGGCGCT GTACGCCGAC ATGGGCCACT TCGGTGCCAA GCCGATCCGC
CACGCCTGGT ACTTCTTCGT GCTGCCGTGC CTGGTGCTGA ACTACCTGGG GCAGGGCGCG
CTGGTGCTCA ACCACCCCGA GGCGGTAAAG AACCCGTTCT TCGAAGCGGT GCCGTCGTGG
GCGCTGTACC CGATGATCAT CCTGGCCACG ATGGCAGCGG TGATTGCCTC GCAGTCGGTC
ATCACCGGCG CGTTCTCGGT CTCGCGCCAG GCCATGCAGC TGGGCTACAT CCCGCGCATG
CGCATCAAGC ACACCTCGCA CGACACCATC GGCCAGATCT ACATCCCGGG CATCAACTGG
GGTATCGCGG TGATGGTGAT CGGCCTGGTG CTGGCCTTCC GCAGCTCGTC CAACCTGGCC
GTGGCCTACG GCATCTCGGT GTCGGCCACG ATGCTGATCG ATACCCTGCT GCTGGCCCTG
GTCGCGCGCT CGCTGTGGCC CAAGGCGCGC AACTGGATCC TGCCGCTGTG CGTGGTGTTC
TTCGTCATTG ACCTGGGCTT TGTCATCGCC AACGGCGCCA AGCTGTTGCA GGGCGCCTGG
TTCCCGGTTG TGCTGGGCAT CTTCCTGTTC ACCATGATGC GTACCTGGCG TCGTGGCCGC
GAACTGCTGC GCGATGAAAT CCGCAAGGAC GGTATCCGCA TCGATACCTT CCTGCCGGGC
CTGATGCTGG CGCCGCCGGT ACGCGTGCCG GGCACCGCGG TGTTCCTGAC CGCCGACCCG
ACCGTGGCCC CGCATGCGTT GATGCACAAC CTCAAGCACA ACAAGGTGCT GCACGAGCGC
AACGTGTTCC TGCACGTGGT AACCCTGCCG GTACCGTATG CGCCGGAGGG GCAGCGCCTC
AAGATTGAAT CGGTGGGCGA CGAGTTCTAC CGGGTCTACG TGCGCTTTGG CTTCATGGAG
ACCCCGGACG TACCACTGGC GCTGATGCGT TCGTGCGACC ACGGCGGCAT CTACTTCGAC
CCGATGGACA CCACCTTCTT CGCCAGCCGC GAAACCATCG TCGCCACCGC CAACCGCGGC
ATGCCGATCT GGCGCGACAA GCTGTTCGCG CTGATGCATC GCAACGCCGC CCCGGCGACG
GGCTTCTTCC GGATCCCGGG CAACAGATTG GTGGAACTGG GCGCCCAGGT GGAGATCTGA
|
|---|
| Protein sequence | MSSSQTPHAA APGGHGHAPP AGGLALIIGA IGVVFGDIGT SPLYTLKEAF SPHYGLNSDH
DTVLGVLSLA FWALNIVVTL KYVTIIMRAD NDGEGGIMAL MALTQRTLRN GSRSAYVVGI
LGIFGASLFF GDGVITPAIS VLGAVEGLEV AAPGLHAFIV PITVVVLLAV FAVQRFGTAK
IGKLFGPITS IWFISLAAIG IYNIVDAPEV LKAFNPWWAI RFFMEHGWHS IFILGAVVLA
VTGGEALYAD MGHFGAKPIR HAWYFFVLPC LVLNYLGQGA LVLNHPEAVK NPFFEAVPSW
ALYPMIILAT MAAVIASQSV ITGAFSVSRQ AMQLGYIPRM RIKHTSHDTI GQIYIPGINW
GIAVMVIGLV LAFRSSSNLA VAYGISVSAT MLIDTLLLAL VARSLWPKAR NWILPLCVVF
FVIDLGFVIA NGAKLLQGAW FPVVLGIFLF TMMRTWRRGR ELLRDEIRKD GIRIDTFLPG
LMLAPPVRVP GTAVFLTADP TVAPHALMHN LKHNKVLHER NVFLHVVTLP VPYAPEGQRL
KIESVGDEFY RVYVRFGFME TPDVPLALMR SCDHGGIYFD PMDTTFFASR ETIVATANRG
MPIWRDKLFA LMHRNAAPAT GFFRIPGNRL VELGAQVEI
|
|---|
| |